Query= MSMg01no417_l10.b1 MSMg01no417_l10.b1 CHROMAT_FILE:
MSMg01no417_l10.b1 PHD_FILE: MSMg01no417_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:41 2005
(557 letters)
>mm_chr12_117463822_117464778
Length = 957
Score = 1062 bits (549), Expect = 0.0
Identities = 552/553 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaggtcaggctgggttacatgcttcctgtcagagggggaaaaaaaaaaggaaga 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggccaggctgggttacatgcttcctgtcagagggggaaaaaaaaaaggaaga 264
Query: 65 ggaaaagaagaagaagaaatcacaagaatattaagacatctcaaagtatcaagccctaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaaaagaagaagaagaaatcacaagaatattaagacatctcaaagtatcaagccctaaa 324
Query: 125 tagcatgattcaaatatcctggccttatggccatcctgaccatgcttttattaagcctat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagcatgattcaaatatcctggccttatggccatcctgaccatgcttttattaagcctat 384
Query: 185 agctatgttcatttgctagtttacaggtgatagagagcctcctgcatgataatcctgggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agctatgttcatttgctagtttacaggtgatagagagcctcctgcatgataatcctgggt 444
Query: 245 ttttcgggctgaaataacctgttaatttctagaatttctagatcagaacaaatgggtttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttcgggctgaaataacctgttaatttctagaatttctagatcagaacaaatgggtttt 504
Query: 305 gtctagagacacggcactagaaacagggccctactcatactctcaatctgttatctctgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtctagagacacggcactagaaacagggccctactcatactctcaatctgttatctctgc 564
Query: 365 ccctccttgtgggaccctcctagaagcaagcacagactcctcctcagtgtacctttgact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccctccttgtgggaccctcctagaagcaagcacagactcctcctcagtgtacctttgact 624
Query: 425 cacatatcagaaccttctggggccctgaaggctgccaaatatcccacacacagaggaggt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cacatatcagaaccttctggggccctgaaggctgccaaatatcccacacacagaggaggt 684
Query: 485 gcctgctatccagcgatggggcaaaagccttttcaggtaggtcatgaacagagaccacgg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcctgctatccagcgatggggcaaaagccttttcaggtaggtcatgaacagagaccacgg 744
Query: 545 tctgcctctgaac 557
|||||||||||||
Sbjct: 745 tctgcctctgaac 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_l10.g1 MSMg01no417_l10.g1 CHROMAT_FILE:
MSMg01no417_l10.g1 PHD_FILE: MSMg01no417_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:41 2005
(392 letters)
>mm_chr12_117550562_117551353
Length = 792
Score = 603 bits (312), Expect = e-177
Identities = 318/322 (98%), Gaps = 4/322 (1%)
Strand = Plus / Minus
Query: 75 tcccagcacttgggaggcagaggcaggtggatttctgagttcaagaccagcctggtctac 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tcccagcacttgggaggcagaggcaggtggatttctgagttcaagaccagcctggtctac 733
Query: 135 agagtgagttccaggacagccagggctacacagagaaaccctgtctcgaaaaaccaa--- 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 agagtgagttccaggacagccagggctacacagagaaaccctgtctcgaaaaaccaaaga 673
Query: 192 -agagagagagagagagagagagagagagagagagagagagagagagagagagagagaga 250
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gagagagagagagagagagagagagagagagagagagagagagagagagagagagagaga 613
Query: 251 gagagagagagagagagagacatctcatctaacatctacagttctctcccctgtgctttc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gagagagagagagagagagacatctcatctaacatctacagttctctcccctgtgctttc 553
Query: 311 catgtgcaaaagatacaagaagccatgtgcatctctgtatgtcctgtgggctgtaccaga 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 catgtgcaaaagatacaagaagccatgtgcatctctgtatgtcctgtgggctgtaccaga 493
Query: 371 caggaaaatgaacagagatcta 392
||||||||||||||||||||||
Sbjct: 492 caggaaaatgaacagagatcta 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 120
Number of extensions: 53
Number of successful extensions: 53
Number of sequences better than 10.0: 1
Number of HSP's gapped: 47
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
