Query= MSMg01no418_f09.b1 MSMg01no418_f09.b1 CHROMAT_FILE:
MSMg01no418_f09.b1 PHD_FILE: MSMg01no418_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:30 2005
(556 letters)
>mm_chr12_112846825_112847780
Length = 956
Score = 1062 bits (549), Expect = 0.0
Identities = 552/553 (99%)
Strand = Plus / Plus
Query: 4 ggaattcattctgtatgccagattggttaaaactcagagatctacctgcctttgccttct 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattctgtaggccagattggttaaaactcagagatctacctgcctttgccttct 263
Query: 64 gagtgctgggattgaaggcatgtaccaccaccacccagctgagccgtgaatcttttttat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagtgctgggattgaaggcatgtaccaccaccacccagctgagccgtgaatcttttttat 323
Query: 124 taaccatcacttctactttgatattacctaaattaggtatgaggtttctcacccattcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taaccatcacttctactttgatattacctaaattaggtatgaggtttctcacccattcag 383
Query: 184 aatactcagcatgtaatatagggacaggatagggacagaaggtcttccagtggagaatac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatactcagcatgtaatatagggacaggatagggacagaaggtcttccagtggagaatac 443
Query: 244 tcctaagttactgctgtggactcagtagtaaagcctttaggtttattttacttgtgtgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcctaagttactgctgtggactcagtagtaaagcctttaggtttattttacttgtgtgta 503
Query: 304 tgaatgttttgctgtgtgcatgtatgtgcacctcctatgtgtaaccctgttcgattccat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaatgttttgctgtgtgcatgtatgtgcacctcctatgtgtaaccctgttcgattccat 563
Query: 364 ggggtagggttatggatgtctgtgagccatcacatagatgccaggaaatcaaaacggggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggggtagggttatggatgtctgtgagccatcacatagatgccaggaaatcaaaacggggt 623
Query: 424 cctcagaggtaagagcaataagtgctcttaactactgagccatctgtcttttatttattt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cctcagaggtaagagcaataagtgctcttaactactgagccatctgtcttttatttattt 683
Query: 484 tttatttttttattttttttattttttatttttttatttttttttggtttttcgagacag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttatttttttattttttttattttttatttttttatttttttttggtttttcgagacag 743
Query: 544 ggtttctctgtat 556
|||||||||||||
Sbjct: 744 ggtttctctgtat 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_f09.g1 MSMg01no418_f09.g1 CHROMAT_FILE:
MSMg01no418_f09.g1 PHD_FILE: MSMg01no418_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:30 2005
(518 letters)
>mm_chr12_113029807_113030724
Length = 918
Score = 768 bits (397), Expect = 0.0
Identities = 407/411 (99%), Gaps = 3/411 (0%)
Strand = Plus / Minus
Query: 110 cacacccataatggacacacctgaaaaactagcccaggagatgcctgagtctccagacca 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 cacacccataatggacacacctgaaaaactagcccaggagatgcctgagtctccagacca 859
Query: 170 gcctgggctccacagcattctgtctcaaacaaagtgaagcaggcagggatacagtcagtt 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gcctgggctccacagcattctgtctcaaacaaagtgaagcaggcagggatacagtcagtt 799
Query: 230 gtagagcccttcccttccatctgggatgtttcaatccctagtactggcacagtgtacaca 289
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gtagagcccttcccttcca-cagggatgtttcaatccctagtactggcacagtgtacaca 740
Query: 290 cg--cacacacacacacacactcagacttgtagaaatctcagcacaagagcaatatggtt 347
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cgcacacacacacacacacactcagacttgtagaaatctcagcacaagagcaatatggtt 680
Query: 348 taagagaagaggggcaggagactgcttctcaagggccccaagaaaaaggagccaaggtgg 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 taagagaagaggggcaggagactgcttctcaagggccccaagaaaaaggagccaaggtgg 620
Query: 408 aggctgtcctggagcacaactttcacaacagacacagaatcacatggatattgggtaact 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aggctgtcctggagcacaactttcacaacagacacagaatcacatggatattgggtaact 560
Query: 468 aagaaatctgacttttatctagaaaagactcaatgtccacaaagcagcttt 518
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aagaaatctgacttttatctagaaaagactcaatgtccacaaagcagcttt 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
