Query= MSMg01no419_e23.b1 MSMg01no419_e23.b1 CHROMAT_FILE:
MSMg01no419_e23.b1 PHD_FILE: MSMg01no419_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:47 2005
(398 letters)
>mm_chr12_95048158_95048957
Length = 800
Score = 739 bits (382), Expect = 0.0
Identities = 395/400 (98%), Gaps = 2/400 (0%)
Strand = Plus / Minus
Query: 1 aattaatataatattaatttgttatggggcttgggggtatccagtcttagcttgtcctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aattaatataatattaatttgttatggggcttgggggtatccagtcttagcttgtcctat 541
Query: 61 acaaataagggaggaaaagtgataaagatctcttgtgactttctgacgaaccccaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 acaaataagggaggaaaagtgataaagatctcttgtgactttctgacgaaccccaagaaa 481
Query: 121 acactcagtttgagattttataaccagaatgattgacactgcttcacatatattgctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acactcagtttgagattttataaccagaatgattgacactgcttcacatatattgctctt 421
Query: 181 cttcttccatattagtaagaagaggtgtcattgattatgttaaggagagcataagcatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cttcttccatattagtaagaagaggtgtcattgattatgttaaggagagcataagcatag 361
Query: 241 gatttatttccaaagcaatgacttcat--aaaaaaaaaaaagaataaagaaacatgggta 298
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 360 gatttatttccaaagcaatgacttcataaaaaaaaaaaaaagaataaagaaacatgggta 301
Query: 299 atgcatgctaggagcctatagaatcatgtgtgactctacctctaaggtcagtactctacc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 300 atgcatgctaggagcctatagaatcatgtgtgactctacctctaaggtcagtattctacc 241
Query: 359 tctaaggtcagtactctcctgagcatgctcgttataaagt 398
|||||||||||||||||||||||||| || ||||||||||
Sbjct: 240 tctaaggtcagtactctcctgagcatacttgttataaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 800
Length adjustment: 9
Effective length of query: 389
Effective length of database: 791
Effective search space: 307699
Effective search space used: 307699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_e23.g1 MSMg01no419_e23.g1 CHROMAT_FILE:
MSMg01no419_e23.g1 PHD_FILE: MSMg01no419_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:47 2005
(413 letters)
>mm_chr12_94914511_94915322
Length = 812
Score = 731 bits (378), Expect = 0.0
Identities = 405/414 (97%), Gaps = 3/414 (0%)
Strand = Plus / Plus
Query: 1 ttaacttctaccctaggggttaaacaaagtgtgccttttcaaagctctcctttcttagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaacttctaccctaggggttaaacaaagtgtgccttttcaaagctctcctttcttagct 260
Query: 61 cacctgtcatcaatac-aagtttgtggaagaaatagatggtaaagagaaatctaatggcg 119
|||||||||||||||| || |||||||||||| ||||||||| |||||||||||||||||
Sbjct: 261 cacctgtcatcaatacgaa-tttgtggaagaagtagatggtacagagaaatctaatggcg 319
Query: 120 agacaattaataatgcttgtctaggcatcagatacacatgtacattttctaggctgtgct 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agacaat-aataatgcttgtctaggcatcagatacacatgtacattttctaggctgtgct 378
Query: 180 ttctactgggaccctccacagtaaagcacaatggcaggtcccaaccctcgtgtctgctca 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 379 ttctactgggaccctccacagtaaagcccaatggcaggtcccaaccctcgtgtcttctca 438
Query: 240 tcaatgatctcagagacatgacactctggatccaatgtgagttgaaacaacttagaataa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcaatgatctcagagacatgacactctggatccaatgtgagttgaaacaacttagaataa 498
Query: 300 tgggtttttgtagtggtggagtgaaacgaagtttaacaggatgtcatggatggaagtgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgggtttttgtagtggtggagtgaaacgaagtttaacaggatgtcatggatggaagtgat 558
Query: 360 gatcacctgactaaatcccaattgctcacatgtacttttatcttctaacaaaac 413
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 559 gatcacatgactaaatcccaattgttcacatgtacttttatcttctaacaaaac 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 812
Length adjustment: 9
Effective length of query: 404
Effective length of database: 803
Effective search space: 324412
Effective search space used: 324412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
