Query= MSMg01no421_p20.b1 MSMg01no421_p20.b1 CHROMAT_FILE:
MSMg01no421_p20.b1 PHD_FILE: MSMg01no421_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:20 2005
(588 letters)
>mm_chr12_119181375_119182361
Length = 987
Score = 1100 bits (569), Expect = 0.0
Identities = 584/589 (99%), Gaps = 2/589 (0%)
Strand = Plus / Plus
Query: 1 actcaagactccttcagacaggcctacagttaaacatgacacaattattccaccaccaac 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcaagactccgtcagacaggcctacagttaaacatgacacaattattccaccaccaac 260
Query: 61 ataacatttagtaactgcaaaccagctgacaaggcaaggtttttattaatgttaccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataacatttagtaactgcaaaccagctgacaaggcaaggtttttattaatgttaccacca 320
Query: 121 ctgtgaggagagccagtcattataaaacaaatgtcaacaaaaggttgtctcctttttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgaggagagccagtcattataaaacaaatgtcaacaaaaggttgtctcctttttact 380
Query: 181 gtattagtttggtaaaatgaaaatttatatcagataggtaatacatctgttagccaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtattagtttggtaaaatgaaaatttatatcagataggtaatacatctgttagccaatat 440
Query: 241 taggtctctttctaatacagactattgttaaaagaatatatggggagcaaattcaggaag 300
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 taggtctctttctaa-acagactattgttaaaagaatatatggggagcaaatgcaggaag 499
Query: 301 aagtaaaaattatctttaaaaaatatttatatcctgagaaacaaacgagcattcatcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aagtaaaaattatctttaaaaaatatttatatcctgagaaacaaacgagcattcatcttg 559
Query: 361 ctgtgaggttactctgggcaagattcaagttcagagccgacttccatgatacttgtgggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgtgaggttactctgggcaagattcaagttcagagccgacttccatgatacttgtgggg 619
Query: 421 atttgaaagattaaagtgatataattttataaagatgcttcacggttcagcaacttcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atttgaaagattaaagtgatataattttataaagatgcttcacggttcagcaacttcttt 679
Query: 481 gatatgtaagccagtaaatttgctttggggaaaaaaaa-tacatgttgataaatcttccc 539
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 680 gatatgtaagccagtaaatttgctttggggaaaaaaaaatacatgttgataaatcttccc 739
Query: 540 agatatgttttctgtcgattgatttgttaagatatattttaaatgaaat 588
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 740 agatatgttttctgtcgattgattcgttaagatatattttaaatgaaat 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 987
Length adjustment: 10
Effective length of query: 578
Effective length of database: 977
Effective search space: 564706
Effective search space used: 564706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_p20.g1 MSMg01no421_p20.g1 CHROMAT_FILE:
MSMg01no421_p20.g1 PHD_FILE: MSMg01no421_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:20 2005
(499 letters)
>mm_chr12_119276009_119276913
Length = 905
Score = 899 bits (465), Expect = 0.0
Identities = 493/505 (97%), Gaps = 6/505 (1%)
Strand = Plus / Minus
Query: 1 aatttatgtgccttattgttttctaagaggcaggtattaaattcctatatcttatgtggt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 705 aatttatgtgccttattgttttctaagaggcaggtattaaattgctatatcttatgtggt 646
Query: 61 ctgattaaatattgatattgagacaacaaaagaatgagtttgtaccatgtgatcattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 645 ctgattaaatattgatattgagacaacaaaagaatgagtttgtaccatgtgatcactgat 586
Query: 121 gaaacctggcaatgcaaattaagttgttcctatggctacagattgtgtttaaatgctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gaaacctggcaatgcaaattaagttgttcctatggctacagattgtgtttaaatgctttg 526
Query: 181 ccaagcatgccatgtggttgtcctggggacagcagagacaagaggtcccgtgtcatacca 240
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 525 ccaagcatgccatgtgattgtcctgggaacagcagagacaagaggtcccgtgtcatacca 466
Query: 241 aaaaggcaatccgagacctgttgttggagcagggtaagagttcaggagccaatactactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 aaaaggcaatccgagacctgttgttggagcagggtaagagttcaggagccaatactactc 406
Query: 301 ctaggtagcattagtaaccactgctttctgaatgaagacaatgcttctcagaaaacagag 360
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctaggtagcatcagtagccactgctttctgaatgaagacaatgcttctcagaaaacagag 346
Query: 361 gttggagcctacatacatgtatgagagaggacaggacactggctaactgcagtggtgcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gttggagcctacatacatgtatgagagaggacaggacactggctaactgcagtggtgcac 286
Query: 421 attcttagttgtggaatacaggtc----ttttttttttttaagatgtcaaaggtgttatt 476
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 285 attcttagttgtggaatacaggtcttttttttttttttttaagatgtcaaaggtgttatt 226
Query: 477 tactttttaaaaaaa--ttattaga 499
||||||||||||||| ||||||||
Sbjct: 225 tactttttaaaaaaaatttattaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 905
Length adjustment: 10
Effective length of query: 489
Effective length of database: 895
Effective search space: 437655
Effective search space used: 437655
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
