Query= MSMg01no422_i17.b1 MSMg01no422_i17.b1 CHROMAT_FILE:
MSMg01no422_i17.b1 PHD_FILE: MSMg01no422_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:00 2005
(184 letters)
>mm_chr12_74255331_74255915
Length = 585
Score = 313 bits (162), Expect = 3e-90
Identities = 175/180 (97%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 1 aattttaagagatttaggatatctaaaacaatgaggatgattggggaagtaataaaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattttaagagatttaggatatctaaaacaatgaggatgattggggaagtaataaaaccc 260
Query: 61 aagcagtaatttcatctgtgacccttt-gtcttcctagttatcttgaaggcaggaacaat 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 aagcagtaatttcatctgtgaccctttagtcttcctagttatcttgaaggcaggaacaat 320
Query: 120 caagtgtttaatactctgtgagtgtgtgtgtgtgtgtgtgtgtgtgagtgtgagtgtgtg 179
|||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||
Sbjct: 321 caagtgtttaatactctgtgagtgtgtgtgtgtgtgtgtgagtg--agtgtgtgtgtgtg 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 585
Length adjustment: 8
Effective length of query: 176
Effective length of database: 577
Effective search space: 101552
Effective search space used: 101552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no422_i17.g1 MSMg01no422_i17.g1 CHROMAT_FILE:
MSMg01no422_i17.g1 PHD_FILE: MSMg01no422_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:01 2005
(308 letters)
>mm_chr12_74409527_74410234
Length = 708
Score = 565 bits (292), Expect = e-165
Identities = 304/308 (98%)
Strand = Plus / Minus
Query: 1 gagtgttaaattacattctcatttcattgtgttcaagaagtgcggttattaaatacagag 60
||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||
Sbjct: 508 gagtgttaaattacattctcatttcattgtgctcaagaagtgtggttactaaatacagag 449
Query: 61 gaaaatgagaaggcttgtaagagagtcacgttacactctgcccagacagcctgtgttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaaaatgagaaggcttgtaagagagtcacgttacactctgcccagacagcctgtgttcta 389
Query: 121 cccagttcatgaggctctctagtccaggaagtgcataagcccatagcacttacagtgagg 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cctagttcatgaggctctctagtccaggaagtgcataagcccatagcacttacagtgagg 329
Query: 181 agaagcaggctgggagacactaggcttgggagagccatatatactttctgttagtcacgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agaagcaggctgggagacactaggcttgggagagccatatatactttctgttagtcacgg 269
Query: 241 actagttaaagccagttttagtgcatctctttggacatatgtgggctttttccaactgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 actagttaaagccagttttagtgcatctctttggacatatgtgggctttttccaactgcc 209
Query: 301 acttggga 308
||||||||
Sbjct: 208 acttggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
