TGGCGGCGCTATACGACTCACTATATTCAGAGGATCCGCGGAATTCCTAA
ATTCATACCAACACTTTCAAGCCCCACACAGAATAAAAGCTGTAAATAGA
GCTCCATAAACCCTCATGTGTCACAGGCTAATTGCATTAGGAAAAGAAAG
CAGGCTTGGAGCAAATTTATGATGAAGGAAAACATTCTTTCTAGGTTAGG
TATGAGACCATTATCTGGTAACTAAAGTAATAAACTGAAAATGGGCAATT
TATTATAGGTGCAAGGACAGAAAATAAATGATGGACTAGTTTATTCCATA
CAAGACTTCAAAATAATGAGATACAAGGCAGATAATTTATCTCTTGACAA
AACCCTGCTAACTTATGACATAAAAACATTGCTTTAAACTTATAATGAAC
TTATGGATCTAGTAACAGATAGTGAATATTTAGTCAGGTAATAGTTTTAA
TGGAAAGGCATGTAAACAACTCTGCTGTAATTCCTTAAATCTTATCTATG
ATACAAAATATTGCCTTANACTTAGTATGAACTCATAGAATGTAAAAATT
CTTAGAAAATCATGTGACCAATTATCCTGGCAAANGATAAAAACTAAGAA
CAACAAGAAAATGGTGGTGCAGCCTTCTTTAGCTTCATCTAGNATGCATG
TGTCTCTAAGTGGGGCTTTTTCCTTCTTTCCAATCTTTCTTCCTTCCTTT
CCATCTTTCTTCCTTTCCTTTCCTTTCCTTTTCCCTTTTTCCTTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCACTGAAACAGAAATGGTTCTACATGAGGGTT
GAGAGGGGAACGGCTAGGGAGGACACCAGGCTGTTTCCCACCACACACAG
CACAGCTGTGCATGGATACCTGCTAAGGCTTTTTGGTTGTTTTGTTTTGT
TTTGTTTTGTTTTATGACTGAGGAAGTTTCTAGGAAAACGTAACTGTGTC
TCTCAGATCTACCCCACAGAAAATAAATGTAAATGTCTTCTCTGAGGAGA
GACATGTCCCCCCCACCCTGTTAAATCAAAAAACAACAATAGAGATTTGT
TGTGATGTAAGGTATCAAAATATCATTGAAAGTTATAATGTAAGCCTGCT
GAAGAGAACACTGCTGTGTAATAGCCTATAATCTATGCCTGGAATATACT
TTTTCATGTGTTGAAGTTTGTAATTTTTCCAATATTTCAAACTGTCAGCA
CACATGTTATAACTTGTTATACCACATATTTCCACTTCACATCAGTTCCA
AAATTATTGGTATAAAGAAACTGTGTTCATATGTATAGAGAGTTCTTTCA
TTTTCTAGGTTTTAGAGACGCTCATTTGGGAGGGGATAATTACATATTTT
AAACTCTCCCCTTTAACTCCTCCGGTTCCTTCCATTCAAATTATGGACCA
ATCTTTATTATTATAAAAACCTGGCGGGGTTAAAAATTGCCAAACTG

Query= MSMg01no422_k20.g1 MSMg01no422_k20.g1 CHROMAT_FILE:
MSMg01no422_k20.g1 PHD_FILE: MSMg01no422_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:11 2005
         (474 letters)



>mm_chr12_73412183_73413055
          Length = 873

 Score =  723 bits (374), Expect = 0.0
 Identities = 436/474 (91%), Gaps = 28/474 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccactgaaacagaaatggttctacatgagggttgagaggggaacggctagggaggacacc 60
           |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
Sbjct: 228 ccactgaaacagaaatggttctacatgaggtttgagaggggaacggctaaggagga---- 283

                                                                       
Query: 61  aggctgtttcccaccacacacagcacagctgtgcatggatacctgctaaggctttttggt 120
                                  |||||||||||||||||||||||||||||||||||||
Sbjct: 284 -----------------------cacagctgtgcatggatacctgctaaggctttttggt 320

                                                                       
Query: 121 tgttttgttttgttttgttttgttttatgactgaggaagtttctaggaaaacgtaactgt 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 321 tgttttgttttgttttgttttgatttatgactgaggaagtttctaggaaaaagtaactgt 380

                                                                       
Query: 181 gtctctcagatctaccccacagaaaataaatgtaaatgtcttctctgaggagagacatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 381 gtctctcagatctaccccacagaaaataaatgtaaatgtcttctctgaggagagacatg- 439

                                                                       
Query: 241 cccccccaccctgttaaatcaaaaaacaacaatagagatttgttgtgatgtaaggtatca 300
           ||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 440 ccccccccccctgcaaaatcaaaaaacaacaatagagatttgttgtaatgtaaggtatca 499

                                                                       
Query: 301 aaatatcattgaaagttataatgtaagcctgctgaagagaacactgctgtgtaatagcct 360
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 500 aaatatcattgaaagttataatgtaagtctgctgaagagaacactgctgtgtaatagcct 559

                                                                       
Query: 361 ataatctatgcctggaatatactttttcatgtgttgaagtttgtaatttttccaatattt 420
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 ataatctatgcctggaatatacttttttatgtgttgaagtttgtaatttttccaatattt 619

                                                                 
Query: 421 caaactgtcagcacacatgttataacttgttataccacatatttccacttcaca 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caaactgtcagcacacatgttataacttgttataccacatatttccacttcaca 673


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 873
Length adjustment: 10
Effective length of query: 464
Effective length of database: 863
Effective search space:   400432
Effective search space used:   400432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)