XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACAT
GGATACACTGATAATAGTTCATTTACTCTGAATGAACCTTCAAACTAGAT
ATCATTCAAAGTACTGTCTTAAAGAGTCATTGAATTTGGTGTTTATGAAC
TCACCCAGACGCACTACAGTGAAGGGAATACACTCCATACTAGTGTCAGA
GATAAGAACAACCACCTAACCAAGGGAGCTCTACTGAACTATGCAATGGC
TACTACTGACTTAAAATGAATTGTCAAACTGATCTGTGTATCTGCCGTCT
ATTCCACAGTGTTCTCACATTGCTGGTTCTCTAATCAAAATACAGCATAA
AGATCTGGTTTCTGGGCTTTGCCTACAAAGGATAAACAGGCTGAGAAAGA
AATTAGTGAAACAACACCCTTCACAATAGTCACAAATAATATAAAATACC
TTGGTGTGACTCTAACTAAGGAAGTAAAAGATCAGTATGGTAAGAACTTC
AAGTCTCTGAAGAAAGAAATCTAAGAAGATCTCAGAAGATGGAATGATCT
CCCATGCTCATGGATTGGCAGGATTAGTATAGTAAAAATGGCTATCTTGC
TAATAGCAATCTACAAATTCCGTGCGGATCCCAACAAAACTCAATTCCTC
CCAGAGTTTACAAGAGCAATTTGCGAAGAAACTTGTACAACATTCAATCT
TACGAAGCATAAACCTAGGTCCCTTTATTGTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTGCACCTCACAGACTAATTTCCAATCTGGGGGA
AGAACTGATTTTCCTAATAAGAATAAGAATAGTCTAATTTATATTGAAGT
ATCATTGATACAGTAAGTCTTCAGACTTCTTAGGGTATCGACTTAAATCC
CATTTGAGGATTATATTGAAGATATGACTAGGCCCAACAAGTTGGTTAGA
AACTAGAGGTTGACTTAACATGAAAATCAGATTTTGTAGAATCATTGTCT
TTCATTTCATTCTTTTTTATTAGATCTTTTCTTTATTTACATTTCAAATT
TTATCCCCTTTCCTCATTTCCCTTCCCAATGCCCCCCTCCCATCCCATCC
CCCTTTCCTTTGTCACTAACCTACCAACTCCTGCTTCCCTGTTCTGGCAT
TATTTTGCACTGGGGCACTGAGCCTTCACAAGACAAAGGGCCTCTCCTCT
CACTGATGTCCCACAAGGCCATCCTCTGCTACATATTCAGCTGGAGCCAT
GGGTTCCTCCATGTGTATTCTAAGGCTGGTGGTTTAGTCTCTGGGAGATC
TGGGGGTACTGGTTAGTTCGTATTATTGTTCCTCCTATGGGGCTACAAAG
TCCTTCAGCTCCTTGGGTCCTTTCTCTAGATCCTTCATTGTGTGCCTTGT
GCTCAGTCCCATGGATGGCTGTGAGGATTCCT

Query= MSMg01no423_j01.b1 MSMg01no423_j01.b1 CHROMAT_FILE:
MSMg01no423_j01.b1 PHD_FILE: MSMg01no423_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:16 2005
         (488 letters)



>mm_chr12_61387785_61388672
          Length = 888

 Score =  859 bits (444), Expect = 0.0
 Identities = 477/488 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgataatagttcatttactctgaatgaaccttcaaactagatatcattcaaagtactgtc 60
           ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 504 tgataatagtttatttactctgaatgaaccttccaaccagatatcattcaaagtactgtc 445

                                                                       
Query: 61  ttaaagagtcattgaatttggtgtttatgaactcacccagacgcactacagtgaagggaa 120
           |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 444 ttaaagagtcattgaatttggtgtttgtgaactcacccagacacactacagtgaagggaa 385

                                                                       
Query: 121 tacactccatactagtgtcagagataagaacaaccacctaaccaagggagctctactgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 384 tacactccatactagtgtcagagataagaacaaccacctaaccaagggagctcaactgaa 325

                                                                       
Query: 181 ctatgcaatggctactactgacttaaaatgaattgtcaaactgatctgtgtatctgccgt 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||
Sbjct: 324 ctatgcaatggctactactgacttaaaatgaaatgtcaaactgatctgtgtttctgctgt 265

                                                                       
Query: 241 ctattccacagtgttctcacattgctggttctctaatcaaaatacagcataaagatctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctattccacagtgttctcacattgctggttctctaatcaaaatacagcataaagatctgg 205

                                                                       
Query: 301 tttctgggctttgcctacaaaggataaacaggctgagaaagaaattagtgaaacaacacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tttctgggctttgcctacaaaggataaacaggctgagaaagaaattagtgaaacaacacc 145

                                                                       
Query: 361 cttcacaatagtcacaaataatataaaataccttggtgtgactctaactaaggaagtaaa 420
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 144 cttcacaatagtcacaaataatataaaataacttggtgtgactctaactaaggaagtaaa 85

                                                                       
Query: 421 agatcagtatggtaagaacttcaagtctctgaagaaagaaatctaagaagatctcagaag 480
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  agatcagtatgataagaacttcaagtctctgaagaaagaaatctaagaagatctcagaag 25

                   
Query: 481 atggaatg 488
           ||||||||
Sbjct: 24  atggaatg 17


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space:   419684
Effective search space used:   419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no423_j01.g1 MSMg01no423_j01.g1 CHROMAT_FILE:
MSMg01no423_j01.g1 PHD_FILE: MSMg01no423_j01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:17 2005
         (557 letters)



>mm_chr12_61232363_61233319
          Length = 957

 Score = 1046 bits (541), Expect = 0.0
 Identities = 553/557 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgcacctcacagactaatttccaatctgggggaagaactgattttcctaataagaataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgcacctcacagactaatttccaatctgggggaagaactgattttcctaataagaataa 260

                                                                       
Query: 61  gaatagtctaatttatattgaagtatcattgatacagtaagtcttcagacttcttagggt 120
           ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gaatagtctcatttatattgaagtatcattgagacagtaagtcttcagacttcttagggt 320

                                                                       
Query: 121 atcgacttaaatcccatttgaggattatattgaagatatgactaggcccaacaagttggt 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctacttaaatcccatttgaggattatattgaagatatgactaggcccaacaagttggt 380

                                                                       
Query: 181 tagaaactagaggttgacttaacatgaaaatcagattttgtagaatcattgtctttcatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaaactagaggttgacttaacatgaaaatcagattttgtagaatcattgtctttcatt 440

                                                                       
Query: 241 tcattcttttttattagatcttttctttatttacatttcaaattttatcccctttcctca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcattcttttttattagatcttttctttatttacatttcaaattttatcccctttcctca 500

                                                                       
Query: 301 tttcccttcccaatgcccccctcccatcccatccccctttcctttgtcactaacctacca 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 tttcccttcccaatgcccccctcccatcccatccccctttcccttgtcactaacctacca 560

                                                                       
Query: 361 actcctgcttccctgttctggcattattttgcactggggcactgagccttcacaagacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actcctgcttccctgttctggcattattttgcactggggcactgagccttcacaagacaa 620

                                                                       
Query: 421 agggcctctcctctcactgatgtcccacaaggccatcctctgctacatattcagctggag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agggcctctcctctcactgatgtcccacaaggccatcctctgctacatattcagctggag 680

                                                                       
Query: 481 ccatgggttcctccatgtgtattctaaggctggtggtttagtctctgggagatctggggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccatgggttcctccatgtgtattctaaggctggtggtttagtctctgggagatctggggg 740

                            
Query: 541 tactggttagttcgtat 557
           |||||||||||||||||
Sbjct: 741 tactggttagttcgtat 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space:   518009
Effective search space used:   518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)