Query= MSMg01no426_c19.b1 MSMg01no426_c19.b1 CHROMAT_FILE:
MSMg01no426_c19.b1 PHD_FILE: MSMg01no426_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:37 2005
(429 letters)
>mm_chr12_94287883_94288710
Length = 828
Score = 791 bits (409), Expect = 0.0
Identities = 421/429 (98%), Gaps = 7/429 (1%)
Strand = Plus / Plus
Query: 1 ggaaaaaatatctctactgcaggacctcatttacccaggtatcagacagagagaacagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaaaaaatatctctactgcaggacctcatttacccaggtatcagacagagagaacagca 260
Query: 61 tttgatttagatcagattgactcgtacactgactgttgagaatagcaatgtaaccaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgatttagatcagattgactcgtacactgactgttgagaatagcaatgtaaccaagaa 320
Query: 121 ttgtcaagcaaggctcactgcaatagggagaggataattcacatacataatttttatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtcaagcaaggctcactgcaatagggagaggataattcacatacataatttttatctg 380
Query: 181 tctcctttgcctccacagagaattttattctttgttctttgtttttgcagagaagaataa 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 tctcctttgcctccacagagaattttattctttgtt-------tttgcagagaagaataa 433
Query: 241 tatgttaaagaatttatggttagaaattatttacctcctcttagatagaaaaaatgagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tatgttaaagaatttatggttagaaattatttacctcctcttagatagaaaaaatgagat 493
Query: 301 tccctagagaaaagaatataacattaatatttgataaggagatgtggctaatgggacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tccctagagaaaagaatataacattaatatttgataaggagatgtggctaatgggacaaa 553
Query: 361 taatagcagccctgtgagttgaaagggggtaaaatattagttcatatattacatgcaata 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 taatggcagccctgtgagttgaaagggggtaaaatattagttcatatattacatgcaata 613
Query: 421 tgttactgt 429
|||||||||
Sbjct: 614 tgttactgt 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 828
Length adjustment: 9
Effective length of query: 420
Effective length of database: 819
Effective search space: 343980
Effective search space used: 343980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_c19.g1 MSMg01no426_c19.g1 CHROMAT_FILE:
MSMg01no426_c19.g1 PHD_FILE: MSMg01no426_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:37 2005
(461 letters)
>mm_chr12_94401191_94402051
Length = 861
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%)
Strand = Plus / Minus
Query: 1 tcttgtctgcacctcatatctcccaataagagtaaagggattgcaaatgaacataacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcttgtctgcacctcatatctcccaataagagtaaagggattgcaaatgaacataacttt 259
Query: 61 gtctgactttatgtgggttctgtctttaatactgaaccaaatccccaagctctatgcctg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 258 gtctgactttatgtgggttctgtctttaatactgagccaaatccccaagctctatgcctg 199
Query: 121 ctgcagaccctctggatccctttgtctgcgtggagcgggtctctggggcaggtgggcaaa 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ctgcagatcctctggatccctttgtctgcgtggagcgggtctctggggcaggtgggcaaa 139
Query: 181 gcgttggatgaaataatagacagatgcacacaggagaagttgtgtagaatctgaatgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gcgttggatgaaataatagacagatgcacacaggagaagttgtgtagaatctgaatgtaa 79
Query: 241 tttgtcaaatcgagcatcaaactttttatacagaagaaaatagggaagttgggtgacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tttgtcaaatcgagcatcaaactttttatacagaagaaaatagggaagttgggtgacaca 19
Query: 301 ccaacaaggtacaaagag 318
||| ||||||||||||||
Sbjct: 18 ccagcaaggtacaaagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
