Query= MSMg01no426_d01.b1 MSMg01no426_d01.b1 CHROMAT_FILE:
MSMg01no426_d01.b1 PHD_FILE: MSMg01no426_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:38 2005
(317 letters)
>mm_chr12_71396338_71397054
Length = 717
Score = 605 bits (313), Expect = e-178
Identities = 316/317 (99%)
Strand = Plus / Plus
Query: 1 aatacactggtagctatttatcagcagaaaatgctgtattgtaaggatttatatgtgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatacactggtagctatttatcagcagaaaatgctgtattgtaaggatttatatgtgctg 260
Query: 61 ttttcataggataacttcctgagcacatttggaagccatagttggttcagcattattact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttcataggataacttcctgagcacatttggaagccatagttggttcagcattattact 320
Query: 121 tattgatctgttttccttaaagcattttaattctagctcgtgctaacagaggtgctctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattgatctgttttccttaaagcattttaattctagctcgtgctaacagaggtgctctgt 380
Query: 181 attcagaatcacagagcagtgctgtgaattttctgcctgtgcactgaagtcttgagagag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 attcagaatcacagagcagtgctgtgaattttctgcctgtgcactgaagtcttgagaggg 440
Query: 241 agaaggatatggttccaaaggctgtttataattttggatttcttggatatttgttttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaggatatggttccaaaggctgtttataattttggatttcttggatatttgttttcta 500
Query: 301 acttgaggtggtttctg 317
|||||||||||||||||
Sbjct: 501 acttgaggtggtttctg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_d01.g1 MSMg01no426_d01.g1 CHROMAT_FILE:
MSMg01no426_d01.g1 PHD_FILE: MSMg01no426_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:38 2005
(534 letters)
>mm_chr12_71557269_71558203
Length = 935
Score = 949 bits (491), Expect = 0.0
Identities = 525/537 (97%), Gaps = 5/537 (0%)
Strand = Plus / Minus
Query: 1 attctttctaggcccagggtttcg-ttaaaactcatgttctccaggaactgctctgacca 59
||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 735 attctatctagtcccagggtttcgtttaaaactcatgttctccaggaactgctctgacca 676
Query: 60 actgtggcttctcccatcgcccggcttcctacaggactcgttaggactctgggctaatag 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 675 actgtggcttctcccatcgcccggcttcctacaggactcgttaggactctgagctaatag 616
Query: 120 ttactgatgatattttagagaaccataccaattctgaggaccgtctacagacactacaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttactgatgatattttagagaaccataccaattctgaggaccgtctacagacactacaaa 556
Query: 180 tctccaaaacaaggagtgttttatgtatcattcatcga-t-tgctatttctatgacttac 237
|||||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 555 tctccaaaacaaggagtgttttatgtatcattcatcgactat--tatttctatgacttaa 498
Query: 238 tgtaccactaactaaaatcaaataaagctctcaagtccttgctaaatatgagattaccta 297
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgtgccactaactaaaatcaaataaagctctcaagtccttgctaaatatgagattaccta 438
Query: 298 agctcttcaaatataatgcgagtcagaggcctactgctctcattacactgtgatctaatc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agctcttcaaatataatgcgagtcagaggcctactgctctcattacactgtgatctaatc 378
Query: 358 ctctccccaaccaagaacctccaaatacttactgataaatagaaggaagagcagttatga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctctccccaaccaagaacctccaaatacttactgataaatagaaggaagagcagttatga 318
Query: 418 taaaccgtccactcagtcctacaaatgacaaggaataaacaacaattagggacaattgct 477
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 taaaccgtccacttagtcctacaaatgacaaggaataaacaacaattagggacaattgct 258
Query: 478 tacttaaaagttaactttaaattacttaaatgctattaagaacaagaaaacacctaa 534
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 257 tacttaaaagttaactttaaattacttaaatgctaataagaacaagaaaacacctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space: 484700
Effective search space used: 484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
