Query= MSMg01no426_j08.b1 MSMg01no426_j08.b1 CHROMAT_FILE:
MSMg01no426_j08.b1 PHD_FILE: MSMg01no426_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:10 2005
(475 letters)
>mm_chr12_86402955_86403828
Length = 874
Score = 890 bits (460), Expect = 0.0
Identities = 469/472 (99%), Gaps = 1/472 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcttctaacttatcgaggatcatctgagaattagtgtatttgtgttgcctttc 63
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttctaactcat-gaggatcatctgagaattagtgtatttgtgttgcctttc 262
Query: 64 gtatcacattgactgtttggctaccaggtagagattgcttccctgagtactctgccagcg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtatcacattgactgtttggctaccaggtagagattgcttccctgagtactctgccagcg 322
Query: 124 ttcgtacatttcttttagcaatgtgattttgctaaggtgggaacacacttgagctttacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttcgtacatttcttttagcaatgtgattttgctaaggtgggaacacacttgagctttacc 382
Query: 184 tgtgtggcatattgagctgagagagctgaaacttggagctgaagagttctgatcataggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgtgtggcatattgagctgagagagctgaaacttggagctgaagagttctgatcataggc 442
Query: 244 gagtcttcagtaagaaatacttctgtactcttccaagcagattgtcagaattctttgcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagtcttcagtaagaaatacttctgtactcttccaagcagattgtcagaattctttgcag 502
Query: 304 aatcttgacttgtgcttaatatacaggtcagctcgtgtctgttaaattggaagcagcatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aatcttgacttgtgcttaatatacaggtcagctcgtgtctgttaaattggaagcagcatc 562
Query: 364 aatccaaacagtttcagaagtggcctgagctgtatctagcatggtattacagtgtgactg 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 563 aatccaaacagtttcagaagtggcctgagctgtatctaccatggtattacagtgtgactg 622
Query: 424 gcagctacctgaccagtgttagttacacctgactgctctgtcctaactggga 475
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gcagctacctgaccagtgttagttacacctgactgctctgtcctaactggga 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 874
Length adjustment: 10
Effective length of query: 465
Effective length of database: 864
Effective search space: 401760
Effective search space used: 401760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_j08.g1 MSMg01no426_j08.g1 CHROMAT_FILE:
MSMg01no426_j08.g1 PHD_FILE: MSMg01no426_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:10 2005
(452 letters)
>mm_chr12_86584382_86585233
Length = 852
Score = 851 bits (440), Expect = 0.0
Identities = 449/452 (99%)
Strand = Plus / Minus
Query: 1 caggacagctagggctacacagagaaaccctgtctcgaaaaaccaaaaccaaccaaacaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 700 caggacagctagggctacacagagaaaccctgtctcgaaaaaccaaaaccaaccaaccaa 641
Query: 61 acaaacaaagaaaccaaagcctctggctgtatccagagggagctggggtggtggctgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acaaacaaagaaaccaaagcctctggctgtatccagagggagctggggtggtggctgaag 581
Query: 121 gttaggcgtggttgagtctgtgtgtgctggacagaaggctgcaggacttgagtgtgtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 580 gttaggcgtggttgagtctgtgtgtgctggacagaaggctgcaggacttgagtatgtttg 521
Query: 181 agggttgagggtgctcctggtctatctagcctatgttgttccaaccccttaagacactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 520 agggttgagggtgctcctggtctatctagcctatgttgttccaaccccttaagtcactgt 461
Query: 241 tggtgacagccttggctctgttttaagcagagctcttctctgcccacacagctcatttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tggtgacagccttggctctgttttaagcagagctcttctctgcccacacagctcatttct 401
Query: 301 tctcagacttctgctctggatttgaattcaaattgtgttgaatccaaaagataggatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tctcagacttctgctctggatttgaattcaaattgtgttgaatccaaaagataggatctg 341
Query: 361 tgagaatcttactgtaattcaaatacctaaagttctaaccagaacattataataaaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgagaatcttactgtaattcaaatacctaaagttctaaccagaacattataataaaaacc 281
Query: 421 tctcctgaagcgacttcaaagactacttactt 452
||||||||||||||||||||||||||||||||
Sbjct: 280 tctcctgaagcgacttcaaagactacttactt 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
