Query= MSMg01no429_k08.b1 MSMg01no429_k08.b1 CHROMAT_FILE:
MSMg01no429_k08.b1 PHD_FILE: MSMg01no429_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:12 2005
(270 letters)
>mm_chr12_45552521_45553190
Length = 670
Score = 489 bits (253), Expect = e-143
Identities = 263/269 (97%), Gaps = 6/269 (2%)
Strand = Plus / Minus
Query: 5 gaattccttgatttcc---tgcaaaggcaaggatctactctacaaaaggcaagagagttc 61
||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gaattccttga---cccaatgcaaaggcaaggatctactctacaaaaggcaagagagttc 430
Query: 62 acctgcagttctagcctcagaaagcagagggaaccccagagcaagttgaaagtgacacta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 acctgcagttctagcctcagaaagcagagggaaccccagagcaagttgaaagtgacacta 370
Query: 122 tccagattagaaagctctaggtttgattcaaagatccaacctcaaaaacagtaaggtgca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tccagattagaaagctctaggtttgattcaaagatccaacctcaaaaacagtaaggtgca 310
Query: 182 gagtcattgacaaagattcttaactgtatgacatttccccaatcaggaatttgtcataat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gagtcattgacaaagattcttaactgtatgacatttccccaatcaggaatttgtcataat 250
Query: 242 atgcagctctgtttcgcctaaaaaggcag 270
|||||||||||||||||||||||||||||
Sbjct: 249 atgcagctctgtttcgcctaaaaaggcag 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no429_k08.g1 MSMg01no429_k08.g1 CHROMAT_FILE:
MSMg01no429_k08.g1 PHD_FILE: MSMg01no429_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:12 2005
(407 letters)
>mm_chr12_45355908_45356714
Length = 807
Score = 574 bits (297), Expect = e-168
Identities = 324/337 (96%), Gaps = 8/337 (2%)
Strand = Plus / Plus
Query: 1 agttcagttcttgctgctaaggccctaaggcctccattccctgttgcctgtcagccaaga 60
|||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 201 agttcagttcctgctgctaaggacttaaggcctccattccctgttgcctgtcagccaaga 260
Query: 61 tcatctcttggttctttaaagctacctgaatatgtgaagtgaagtttctaagaaagaaag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatctcttggttctttaaagctacctgaatatgtgaagtgaagtttctaagaaagaaag 320
Query: 121 ggaaaactgggaatctgtgataaagattatacaaggctgactaagtagaacctcctgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaaactgggaatctgtgataaagattatacaaggctgactaagtagaacctcctgatt 380
Query: 181 gtggagacctggagtggtacaggtctggagccaaattttcttgagctatctctggatgtt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggagacctggagtggtagaggtctggagccaaattttcttgagctatctctggatgtt 440
Query: 241 ttaata----ttttttcatacctcactttttcttaaagaataattcaataaactttattg 296
|||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaatagccatt----catacctcactttttcttaaagaataattcaataaactttattg 496
Query: 297 tttctagttaggatttaattaatagtcttatttcttt 333
|||||||||||||||||||||||||||||||||||||
Sbjct: 497 tttctagttaggatttaattaatagtcttatttcttt 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
