Query= MSMg01no429_p12.b1 MSMg01no429_p12.b1 CHROMAT_FILE:
MSMg01no429_p12.b1 PHD_FILE: MSMg01no429_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:36 2005
(494 letters)
>mm_chr12_85085817_85086710
Length = 894
Score = 955 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Plus
Query: 1 gcctggacaccatggtaatggcccttccagagggacaagggaaacctaacacataaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctggacaccatggtaatggcccttccagagggacaagggaaacctaacacataaatca 260
Query: 61 atctaaaactgcaataaaccagcatttaaggacagccttaagtttttaaaaatatgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctaaaactgcaataaaccagcatttaaggacagccttaagtttttaaaaatatgattt 320
Query: 121 ctcacagatatttttttcaatatggaataagatacagttactaagagactagataaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcacagatatttttttcaatatggaataagatacagttactaagagactagataaattt 380
Query: 181 tgtctcaataagagatttaaaaaaccgcattttggaatccagaaccacacattttgtgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtctcaataagagatttaaaaaaccgcattttggaatccagaaccacacattttgtgag 440
Query: 241 tatcttcagtgggcataataatgtaagtataagatttcaaatggcataacagtgtttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcttcagtgggcataataatgtaagtataagatttcaaatggcataacagtgtttgtt 500
Query: 301 tcttttatttacatttagtttatctttttagctttattggtttcgttttatatgtatgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttttatttacatttagtttatctttttagctttattggtttcgttttatatgtatgag 560
Query: 361 tatttacctgcaccacatgcatgcctgatgcccacagaagtcaaactagggcatcagatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttacctgcaccacatgcatgcctgatgcccacagaagtcaaactagggcatcagatc 620
Query: 421 ccctgtgactggagtttctcatggctgtaatggttgtgagctgtcatgtggtactaggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccctgtgactggagtttctcatggctgtaatggttgtgagctgtcatgtggtactaggaa 680
Query: 481 ccgaaccagggtct 494
||||||||||||||
Sbjct: 681 ccgaaccagggtct 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_p12.g1 MSMg01no429_p12.g1 CHROMAT_FILE:
MSMg01no429_p12.g1 PHD_FILE: MSMg01no429_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:36 2005
(244 letters)
>mm_chr12_85287561_85288204
Length = 644
Score = 418 bits (216), Expect = e-121
Identities = 236/244 (96%), Gaps = 5/244 (2%)
Strand = Plus / Minus
Query: 1 accgtgtagccaggctggcctcaaatgcctcaaatggaaatccgtttgcctcagcttcct 60
||||||||||||||||| ||||||| | || |||||||||||||||||||||||||||
Sbjct: 527 accgtgtagccaggctgacctcaaa-g--tc--atggaaatccgtttgcctcagcttcct 473
Query: 61 cagtgctgagattacaggcaagagccacactcagctctgcagtatttttatgaatgaaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 472 cagtgctgagattacaggcaagagccacactcagctctgcagtatttttatgaatgaagt 413
Query: 121 tagggagagggaaatcaggcaaaataagaattacatcaggatttgtctaggggttacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tagggagagggaaatcaggcaaaataagaattacatcaggatttgtctaggggttacatg 353
Query: 181 tgccatcatatgtctgtatttatgtgttcctacatacatctatatataatatggatgaat 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgccagcatatgtctgtatttatgtgttcctacatacatctatatataatatggatgaat 293
Query: 241 ggta 244
||||
Sbjct: 292 ggta 289
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
