Query= MSMg01no430_f16.b1 MSMg01no430_f16.b1 CHROMAT_FILE:
MSMg01no430_f16.b1 PHD_FILE: MSMg01no430_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:09 2005
(254 letters)
>mm_chr12_118322979_118323633
Length = 655
Score = 400 bits (207), Expect = e-116
Identities = 233/253 (92%), Gaps = 18/253 (7%)
Strand = Plus / Plus
Query: 1 agcttggtgatattgtgtaaattgtagaagaaggagcaagtggatgtgtcgtggcttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcttggtgatattgtgtaaattgtagaagaaggagcaagtggatgtgtcgtggcttgtg 260
Query: 61 tggttatttacaataggtgttgggtaatcagcactgcacacccccattcagtgaccctcc 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tggttatttacaataggtgttgggtaatcagcactgcacacctccattcagtgaccctcc 320
Query: 121 ccaccgagggctcaggggacatggtaacgagtgtggacacagaggcctcccaatcccaat 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaccgagggctcaggggacatgggaacgagtgtggacacagaggcctcccaatcccaa- 379
Query: 181 ccatctcccaatcccaagctcatctctcagtggaacatcattgctacacacagctgggga 240
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 -----------------gctcatctctcagtggaacatcattgctacacacagctgggga 422
Query: 241 aaccaagtccttg 253
|||||||||||||
Sbjct: 423 aaccaagtccttg 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 655
Length adjustment: 9
Effective length of query: 245
Effective length of database: 646
Effective search space: 158270
Effective search space used: 158270
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_f16.g1 MSMg01no430_f16.g1 CHROMAT_FILE:
MSMg01no430_f16.g1 PHD_FILE: MSMg01no430_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:10 2005
(317 letters)
>mm_chr12_118478344_118479060
Length = 717
Score = 543 bits (281), Expect = e-159
Identities = 308/317 (97%)
Strand = Plus / Minus
Query: 1 aatgtcctggaaagttgttttcccactgaaccatcctcattactgtctccctttgtgttt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aatgtcctggaaagttgttttcccactgaaccatcctcattactgtctccctttgtgttc 458
Query: 61 cttgaatatagactttgcagtgagcaagctgctctgtgctactctgcgctcacttctctc 120
|| | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 457 ctcggatatggactttgcagtgagcaagctgctctgtgctgctctgcgctcacttctctc 398
Query: 121 tcatctccacaccgagccagcagaatcagaggttccctcatgtcaccagtaaccaagagt 180
|||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 397 tcatctccacgccgagccagcagaatctgaggttccctcatgtcaccagcaaccaagagt 338
Query: 181 agacagggatgggcagccatgactgctttgccatgagtgtctggtgctgaagggagctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agacagggatgggcagccatgactgctttgccatgagtgtctggtgctgaagggagctgg 278
Query: 241 ggacatgattcatcctggaatcatgccacgcaattaagtctgtattgaagccccagctca 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ggacatgagtcatcctggaatcatgccacgcaattaagtctgtattgaagccccagctca 218
Query: 301 cgaggaatgttggatga 317
|||||||||||||||||
Sbjct: 217 cgaggaatgttggatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
