Query= MSMg01no430_k18.b1 MSMg01no430_k18.b1 CHROMAT_FILE:
MSMg01no430_k18.b1 PHD_FILE: MSMg01no430_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:38 2005
(468 letters)
>mm_chr12_37003479_37004346
Length = 868
Score = 847 bits (438), Expect = 0.0
Identities = 457/464 (98%), Gaps = 3/464 (0%)
Strand = Plus / Plus
Query: 5 gaattctcacattttctctaaatttcacaaatagcagcctgaagtattttcaaaatcaat 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctcacatttact-taaatttcacaaatagcagcctgaagtattttcaaaatcaat 266
Query: 65 ttctggcttaatctgtgctgtattactgtgaagagactccatgaccaagtcaactttgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttctggcttaatctgtgctgtattactgtgaagagactccatgaccaagtcaactttgat 326
Query: 125 aaaagaaagcatttcattggaagcttacttacagtttcagagacttgatccattattatc 184
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 327 aaaagaaagcatttcattggaagcttacttac--tttcagagacttgatccattattatc 384
Query: 185 atggtggggagtagacactggaggagttgctgagagctttgcagcctcatccactggcag 244
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 atggtggggagtagacactgcaggagtcgctgagagctttgcagcctcatccactggcag 444
Query: 245 caagaaaagagggacactgggcctgatttgggcttttgaagcctcaaagcccactcccgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagaaaagagggacactgggcctgatttgggcttttgaagcctcaaagcccactcccgg 504
Query: 305 tgaaatcagataatctgatatcagattcatcctcttcatagtatctatggatgttaatag 364
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 505 tgaaatcagataatctgatatcagattcatcctcttcatagtatctatgggtgttaatag 564
Query: 365 acatagtaattaattggctctggtattaattatacaatgtaaacatatgccaactcttta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acatagtaattaattggctctggtattaattatacaatgtaaacatatgccaactcttta 624
Query: 425 gattacacacctagaactgcacatttgctagttaaccttttcac 468
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gattacacacctagaactgcacatttgctagttaaccttttcac 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_k18.g1 MSMg01no430_k18.g1 CHROMAT_FILE:
MSMg01no430_k18.g1 PHD_FILE: MSMg01no430_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:38 2005
(128 letters)
>mm_chr12_37211469_37211996
Length = 528
Score = 232 bits (120), Expect = 5e-66
Identities = 126/128 (98%)
Strand = Plus / Minus
Query: 1 aaatgctgtcctgtcagcagagtttttaaaccatatgaggaagaaacaagtatgtataaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aaatgctgtcctgtcagcagagtttttaaaccatatgaggaagaaacaagtatgtataag 269
Query: 61 gatacagatttattcttcttaatattgtgagagaaatgcacctgtacattgatgtttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 268 gatacagatttattcttcttaatattgtgagagaaatgcacctgtacgttgatgtttaaa 209
Query: 121 aataggtg 128
||||||||
Sbjct: 208 aataggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 528
Length adjustment: 8
Effective length of query: 120
Effective length of database: 520
Effective search space: 62400
Effective search space used: 62400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
