MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-431E12
Chromosome	12 (Build37)
Map Location	118,137,433 - 118,137,667
singlet/doublet	singlet
Overlap gene	Ptprn2
Upstream gene	Igh, Ighv1-80, Ighv1-81, Olfr241-ps1, Ighv1-83, EG434609, LOC668595, EG668597, EG668599, Zfp386, Vipr2, LOC676058, Wdr60, LOC100042963, D12Ertd551e, D430020J02Rik, Ncapg2, Rnu7-ps1, LOC627375
Downstream gene	LOC432713, LOC100042461, Rapgef5, A930023M06Rik, Cdca7l, Dnahc11
Link	Open Mouse BAC browser

Click to get alignment info.

name	Igh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111507 MGI:96442
definition	gene_synonym : MGC118122; MGC118132; MGC19003; MGC25748; MGC6342; MGC68311; MGC91096 note : immunoglobulin heavy chain complex

name	Ighv1-80 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668589 IMGT/GENE-DB:IGHV1-80
definition	note : immunoglobulin heavy variable V1-80

name	Ighv1-81 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668591 IMGT/GENE-DB:IGHV1-81
definition	note : immunoglobulin heavy variable V1-81

name	Olfr241-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404357 MGI:3030075
definition	gene_synonym : MOR179-8_p note : olfactory receptor 241, pseudogene 1 pseudo : _no_value

name	Ighv1-83 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620140 IMGT/GENE-DB:IGHV1-83
definition	note : immunoglobulin heavy variable V1-83

name	EG434609 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434609 IMGT/GENE-DB:IGHV1-84 MGI:3644235
definition	gene_synonym : IgH; IGHV1-84 note : predicted gene, EG434609

name	LOC668595 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668595
definition	note : ornithine decarboxylase, structural 1 pseudogene pseudo : _no_value

name	EG668597 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668597 IMGT/GENE-DB:IGHV1-85 MGI:3645723
definition	gene_synonym : IGHV1-85 note : predicted gene, EG668597

name	EG668599 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668599 IMGT/GENE-DB:IGHV1-86 MGI:3645729
definition	gene_synonym : Ighv1-86 note : predicted gene, EG668599

name	Zfp386 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56220 MGI:1930708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Vipr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22355 MGI:107166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676058 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	Wdr60 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217935 MGI:2445085
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	D12Ertd551e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52635 MGI:1261845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D430020J02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319545 MGI:2442237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 26 ESTs

name	Ncapg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76044 MGI:1923294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnu7-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19867 MGI:97993
definition	note : U7 small nuclear RNA, pseudogene 1 pseudo : _no_value

name	Ptprn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19276 MGI:107418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627375 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 619 ESTs, 10 Proteins

name	LOC432713 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:432713
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100042461 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Rapgef5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217944 MGI:2444365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930023M06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77958 MGI:1925208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Cdca7l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217946 MGI:2384982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnahc11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13411 MGI:1100864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp386 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102384 GeneID:56220 MGI:1930708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 386 (Kruppel-like) transcript_id : NM_001004066.2

name	Zfp386 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102383 GeneID:56220 MGI:1930708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 386 (Kruppel-like) transcript_id : NM_019565.3

name	Vipr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678574 GeneID:22355 MGI:107166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vasoactive intestinal peptide receptor 2 transcript_id : NM_009511.1

name	Wdr60 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199780 GeneID:217935 MGI:2445085
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 60 transcript_id : NM_146039.3

name	LOC100042963 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263571 GeneID:100042963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100042963 transcript_id : XM_001478482.1

name	D12Ertd551e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76096371 GeneID:52635 MGI:1261845
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 12, ERATO Doi 551, expressed transcript_id : NM_028731.5

name	D430020J02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263562 GeneID:319545 MGI:2442237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 26 ESTs product : RIKEN cDNA D430020J02 gene transcript_id : XM_001478239.1

name	Ncapg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91208438 GeneID:76044 MGI:1923294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : non-SMC condensin II complex, subunit G2 transcript_id : NM_133762.3

name	Ptprn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859597 GeneID:19276 MGI:107418
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type, N polypeptide 2 transcript_id : NM_011215.1

name	LOC627375 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263573 GeneID:627375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 619 ESTs, 10 Proteins product : similar to high mobility group nucleosomal binding domain 2 transcript_id : XM_001478560.1

name	LOC432713 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263564 GeneID:432713
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical gene supported by AK039060 transcript_id : XM_001478253.1

name	LOC100042461 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263566 GeneID:100042461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Activated in Blocked Unfolded protein response family member (abu-2) transcript_id : XM_001478261.1

name	Rapgef5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802209 GeneID:217944 MGI:2444365
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rap guanine nucleotide exchange factor (GEF) 5 transcript_id : NM_175930.4

name	A930023M06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263575 GeneID:77958 MGI:1925208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA A930023M06 gene transcript_id : XM_001478569.1

name	Cdca7l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122528 GeneID:217946 MGI:2384982
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle associated 7 like transcript_id : NM_146040.1

name	Dnahc11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753651 GeneID:13411 MGI:1100864
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein, axonemal, heavy chain 11 transcript_id : NM_010060.1

name	Ighv1-80 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:668589 IMGT/GENE-DB:IGHV1-80
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-81 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:668591 IMGT/GENE-DB:IGHV1-81
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-83 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:620140 IMGT/GENE-DB:IGHV1-83
definition	codon_start : 1 exception : rearrangement required for product

name	EG434609 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:434609 IMGT/GENE-DB:IGHV1-84 MGI:3644235
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IgH; IGHV1-84

name	EG668597 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:668597 IMGT/GENE-DB:IGHV1-85 MGI:3645723
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV1-85

name	EG668599 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:668599 IMGT/GENE-DB:IGHV1-86 MGI:3645729
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : Ighv1-86

name	Zfp386 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526048 CCDS:CCDS26209.1 GeneID:56220 MGI:1930708
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; kruppel-like protein; Kruppel associated box (KRAB) zinc finger 1 product : zinc finger protein 386 (Kruppel-like) isoform a protein_id : NP_001004066.1

name	Zfp386 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526050 GeneID:56220 MGI:1930708
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; kruppel-like protein; Kruppel associated box (KRAB) zinc finger 1 product : zinc finger protein 386 (Kruppel-like) isoform b protein_id : NP_062511.2

name	Vipr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678575 CCDS:CCDS26210.1 GeneID:22355 MGI:107166
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004999 - vasoactive intestinal polypeptide receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : VIP receptor subtype 2; VPAC2 receptor product : vasoactive intestinal peptide receptor 2 protein_id : NP_033537.1

name	Wdr60 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199781 GeneID:217935 MGI:2445085
definition	codon_start : 1 product : WD repeat domain 60 protein_id : NP_666151.3

name	LOC100042963 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263572 GeneID:100042963
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478532.1

name	D12Ertd551e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67782360 CCDS:CCDS26211.1 GeneID:52635 MGI:1261845
definition	codon_start : 1 product : chr2 synaptotagmin protein_id : NP_083007.2

name	D430020J02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263563 GeneID:319545 MGI:2442237
definition	codon_start : 1 product : hypothetical protein LOC319545 protein_id : XP_001478289.1

name	Ncapg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91208439 CCDS:CCDS26212.1 GeneID:76044 MGI:1923294
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001833 - inner cell mass cell proliferation [Evidence IMP] codon_start : 1 note : more than blood product : leucine zipper protein 5 protein_id : NP_598523.3

name	Ptprn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859598 GeneID:19276 MGI:107418
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA]; GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : protein tyrosine phosphatase, receptor-type, N polypeptide 2; IA-2 beta; snoRNA MBII-51 product : protein tyrosine phosphatase, receptor type, N polypeptide 2 protein_id : NP_035345.1

name	LOC627375 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263574 GeneID:627375
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478610.1

name	LOC432713 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263565 GeneID:432713
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478303.1

name	LOC100042461 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263567 GeneID:100042461
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478311.1

name	Rapgef5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60687514 GeneID:217944 MGI:2444365
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0030742 - GTP-dependent protein binding [Evidence ISS]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0017034 - Rap guanyl-nucleotide exchange factor activity [Evidence ISS]; GO:0005088 - Ras guanyl-nucleotide exchange factor activity [Evidence ISS] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007399 - nervous system development [Evidence ISS]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Mras regulated guanine nucleotide exchange factor product : guanine nucleotide exchange factor for Rap1 protein_id : NP_787126.2

name	A930023M06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263576 GeneID:77958 MGI:1925208
definition	codon_start : 1 product : hypothetical protein LOC77958 protein_id : XP_001478619.1

name	Cdca7l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122529 GeneID:217946 MGI:2384982
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008284 - positive regulation of cell proliferation [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : transcription factor RAM2 protein_id : NP_666152.1

name	Dnahc11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753652 GeneID:13411 MGI:1100864
definition	GO_component : GO:0005858 - axonemal dynein complex [Evidence IDA]; GO:0005929 - cilium [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IDA] GO_process : GO:0001539 - ciliary or flagellar motility [Evidence IDA]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation note : situs inversus viscerum; dynein, axon, heavy chain 11 product : dynein, axonemal, heavy chain 11 protein_id : NP_034190.1

name	Ighv1-80 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668589
definition	standard_name : IGHV1-80

name	Ighv1-81 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668591
definition	standard_name : IGHV1-81

name	Ighv1-83 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:620140
definition	standard_name : IGHV1-83

name	EG434609 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:434609
definition	gene_synonym : IgH; IGHV1-84 standard_name : IGHV1-84

name	EG668597 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668597
definition	gene_synonym : IGHV1-85 standard_name : IGHV1-85

name	EG668599 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668599
definition	gene_synonym : Ighv1-86 standard_name : IGHV1-86

name	LOC676058 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263561 GeneID:676058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to ribosomal protein L32 pseudo : _no_value transcript_id : XR_033601.1

clone name	MSMg01-424N20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-430N03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-503O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-431E12.T7 (MSMg01no431_e12.b1)	MSMg01-431E12.TJ (MSMg01no431_e12.g1)
ACC	AG523576	AG523577
length	765	1,349
length of high quality (start - end)	243 (69 - 311)	---
definition	CHROMAT_FILE: MSMg01no431_e12.b1 PHD_FILE: MSMg01no431_e12.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:54:31 2005	CHROMAT_FILE: MSMg01no431_e12.g1 PHD_FILE: MSMg01no431_e12.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:54:31 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TATTTGCGGCGCTAAACGANCACTATTTTCAGACACAGCGCGGNAATATA CTCTTTTCCTGATTTCTCATAGAGCTGGTGACATGAGACTTGAAGGAAAG GATCCAAGCTACCCAGGGTACCCTGAAGTTCTGAGGAGTTGATTGCTATG GACTCTGGTGTCATCTCCCAGCAGCTCTAGGTGTGGCTGCTGTAGCTGGG TATTTCTTGTATAAATAAGGGCATTGTCAACATCAGAAGAATTCTATACT TAAGTGTCCTGACTCTATCACAAGTTAATCAGTCATCCATCATCATATAA CCCATAAGAATTAGCTCATTGCTTCCCAGAGATGATGACCCAGCTGTGAA GCTATTAATCATCAATGGTTGCTTGTGTAAATGTCCTGTGATCCATTTAA GCACTAGACATCAAATGTTCATGGGTGAAGTACTTTCTAGAAGGTGCTAG AAGAGAGAATTTATCATTGTTGGTGCTTACTTGGGTAAATATGAAAAGAA ATTAATGAGTCATGCAGAGGCGATTGGATATGACCTGGCCAGGAAGAAAC CTGTCCTTGTTTGTGCACTGTTGCGAATGATACCACCTTGTTCCTGAATA GGTTTGCAAGGCCGTTTGGAATGTTCCCCATTCTTATACCTCGATCCTTT TTTTCTTTTTTTTTTTCTTCCTATTCCGCACTCCCCCCTTCTTCCCTTTT TTCCGTCTCCTCTCTCCCTCTCTTTTTTTTTTCTTCTCCTCTTCCTTTCT CCTATTTCTTTTTTN	ACAGAAAAAATGGAGGAGAGAGGAAGCCCCGCGCGTTTTCTCGCGATGTT GTGGTTGGTTGTGCCATGGCAGAGCTCCTCTGGTGGATCATCGATCGTGG GTGAAAACAGAGCATACGGCAGTGGTCGACGCTAGCCACGTGGATGACAT GCATCCATGCTGGAATATACAACAACGAACCCGTACTAGCTAGATATAAC ATGCTTCCATGTGCTACTAACATTACCCAGTCTATAATAGAGTGGCGAGG TATTGATACTATATTGACATAGGTGGTGCGTCGTTCGGCTTTAGTCGTGC GTGCTTGACACAGATTGATTAGTGGATGCGATCCTGCTCATGTGTCCGTT GGCGAGGACCATCTGTCGTACATATATATGTTTTACAGTTCGTCGCCGGT ACACGAAGCATTTTACATCACGGACGTTCGATTATCGTACGATGTATCTA GTGAGACGCCACGCAACGCCCCGCATACGCTAGCGGTCGTCGATCGTATA TATAATGATAACTGTGACTTTATCGCTGACGAATAGCGATGGCGCAACGT CTGTATCAATTACTCCACGTGCTTATAGACTCGCTCTTGTATACTATAAT ACGTTCGGTGTCTCCATTGACACACATTATATATATACCCAGCCGCTTCC GTACGCTCTATGTTCTGGCCATGCGCACATCGCGACTATACACTAGTCAT GCCATCCATACACGACGCATCTCAGTATTGATGAACATCACGACGCTTAC GATCACNGTATGTCATATGATGCATCTCCATCCACACGACTGTGCCTGCT CAGATATTCCGTCTGAAACAGCGACTGCACGACTGTGTTACGCCCTATAC GACGTATCCTATACCTATCCTCGTTCTGTTGTGATTGCACGCATCATCTG ACTGTCACGATGCGTACACGCTGATCAGTGACAACCACAGGCACTTTTGT ACACCAGACCTTGCGCTGNTGTTNNTATTTCAATGCCTCGTAGACGAGCA CCCAGTTATATGAGCGTGGCGATGATAAGACATCGACGGTGCCGCTAACA CTCATATATGATCTCGTTCGACGTGCCGCCAAGACGCGCCGCATCTCTGA GCTACGTACCACGACTGTATCATGTCGTATATATACGCGAGATACACTGT GCGCGCACTGATACGGACATATCTGTATTATTATCCACATCCACGTGATC TATTTTATATGAAGCCCTCCTCCACNCACAGCATCTCTGCTCGGTATCAC ACATCATGCATGTCTAGTGAATAACGCACTATCAGACGTATGTGAGACGC GCGCGCGTCGCATGTGATAGTTAACTACTCTGCACGCTGATGCCTGAAN
quality values	Open. Hide. 10 10 11 15 25 23 13 10 10 15 23 19 23 11 11 11 23 21 3 0 3 17 19 17 8 8 8 7 7 6 6 6 9 9 9 8 8 8 8 9 17 8 3 0 3 8 8 9 19 21 25 12 12 11 16 10 9 9 10 8 8 8 8 10 19 14 19 14 15 23 23 44 48 57 57 48 48 48 48 47 47 47 53 53 53 53 53 53 50 54 68 68 68 68 68 68 68 68 68 50 50 50 50 50 47 47 47 42 44 43 43 39 42 37 30 28 28 42 44 57 57 59 57 57 57 50 51 50 68 68 57 57 57 57 57 57 57 57 57 50 51 50 50 50 51 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 52 52 52 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 57 57 68 68 57 68 68 59 59 57 57 57 57 68 68 68 57 57 57 43 43 43 50 57 57 68 57 59 57 57 57 57 57 57 57 54 54 59 59 48 48 28 28 19 24 15 13 13 15 15 24 34 44 68 68 68 68 59 68 68 68 68 68 68 68 68 68 57 57 54 54 54 57 57 57 59 57 68 68 57 57 54 54 54 48 48 48 59 59 59 59 59 57 57 57 57 57 57 59 59 59 53 53 50 50 41 30 28 12 12 18 18 9 9 9 9 9 9 9 9 22 16 20 34 41 59 59 48 48 48 48 50 50 57 50 50 50 50 50 53 57 57 59 59 57 50 50 50 48 48 43 32 23 15 11 11 11 12 18 32 37 39 41 32 41 41 43 46 48 48 48 57 59 57 59 43 59 39 39 39 43 43 46 44 47 59 47 46 43 37 46 57 57 48 48 48 57 59 59 57 54 54 59 59 59 59 35 24 24 19 18 19 12 11 11 15 25 34 47 48 48 48 48 57 34 41 18 22 28 37 36 57 43 44 43 48 48 39 39 39 36 36 36 37 25 23 11 11 11 18 18 23 32 32 30 32 32 37 37 39 39 39 39 35 35 35 39 32 36 25 25 25 28 25 28 28 28 25 23 23 25 30 23 22 16 14 14 14 24 22 28 30 24 22 18 17 30 30 24 19 24 24 22 21 15 15 15 26 15 13 12 9 8 8 8 10 10 10 11 11 11 14 14 22 18 18 17 17 19 19 23 25 19 19 13 11 8 6 6 7 8 8 11 10 11 9 9 10 12 12 9 8 8 8 8 11 8 11 8 8 8 11 17 15 11 10 11 22 12 12 12 11 12 12 12 12 12 12 12 15 12 12 12 12 12 10 10 16 17 13 10 10 10 8 8 8 8 8 8 8 8 8 9 9 11 9 9 9 11 11 11 11 11 11 11 11 16 12 10 10 10 8 8 8 8 8 8 9 9 11 8 12 17 13 15 8 8 8 8 10 7 7 8 8 9 8 8 8 8 8 10 16 10 10 7 7 9 12 18 30 16 16 13 11 9 9 10 11 13 18 23 16 11 11 11 9 10 8 8 8 8 8 10 10 19 16 15 11 10 12 8 10 8 8 8 10 13 17 18 27 20 22 12 11 9 9 10 14 19 15 13 12 8 8 10 10 10 12 11 6 6 6 7 10 19 19 25 25 23 23 11 13 10 9 9 13 22 22 14 10 10 14 14 10 10 8 10 10 10 13 11 8 8 8 8 9 12 10 10 10 12 15 13 20 3 0	Open. Hide. 6 6 6 7 8 8 10 10 6 6 6 6 8 6 8 9 10 11 10 8 10 8 8 8 8 8 8 8 12 10 10 8 6 6 6 8 8 10 11 11 12 11 11 11 12 8 8 8 8 10 8 10 8 8 8 8 8 8 8 6 6 8 6 6 8 6 9 8 6 6 6 6 8 8 6 6 8 8 8 9 8 8 8 6 6 6 6 8 6 6 8 6 8 6 6 6 6 10 8 10 8 6 6 7 8 11 8 6 6 8 8 8 8 8 8 8 13 10 10 8 8 8 8 8 7 6 8 8 8 8 8 8 8 8 10 10 10 10 10 10 11 9 9 8 8 8 8 8 8 11 11 10 10 10 9 9 9 7 6 6 6 6 6 6 6 6 6 6 8 6 8 8 8 8 8 12 10 10 10 10 10 8 8 8 8 9 9 10 8 8 8 8 8 8 8 8 8 9 9 10 8 6 6 6 8 8 8 8 8 8 8 8 8 8 9 8 8 8 10 8 8 8 6 8 6 7 7 7 6 6 8 6 8 8 8 9 10 10 12 14 11 12 10 8 8 8 10 10 10 10 9 9 9 8 8 6 6 6 6 8 6 6 8 8 8 6 6 8 6 8 8 8 9 8 8 8 8 10 8 8 6 6 6 8 10 10 11 11 13 11 9 7 7 7 7 8 8 10 10 10 12 12 11 8 8 6 6 8 6 6 6 7 10 6 6 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 9 11 11 12 12 11 11 12 12 12 8 8 8 8 8 8 8 8 10 9 12 6 6 6 6 8 8 6 6 6 6 8 6 10 8 8 8 8 8 8 8 8 8 7 6 6 6 8 8 8 8 8 8 8 6 6 6 6 8 8 9 9 7 7 8 8 8 8 8 8 10 8 8 8 6 8 6 6 8 6 6 6 6 8 6 7 7 6 8 8 6 6 6 8 8 6 8 8 8 6 6 6 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 8 8 10 10 8 8 8 10 8 8 8 8 9 10 10 16 15 14 12 10 10 8 8 8 8 8 8 6 6 8 6 6 6 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 8 6 6 8 8 8 8 10 8 8 8 8 8 6 6 6 6 6 6 8 8 10 10 6 8 6 6 8 8 11 8 6 6 7 10 6 10 10 10 10 10 8 6 6 6 8 8 8 8 9 8 8 8 7 7 6 7 8 8 10 11 17 15 13 9 9 9 8 8 8 7 7 7 6 8 8 6 6 6 9 9 11 8 8 7 7 7 8 8 6 6 6 6 8 8 10 8 8 8 8 10 10 8 8 8 8 10 8 9 9 8 8 6 6 6 6 6 8 8 10 8 10 8 8 8 8 8 11 9 8 7 11 6 6 8 10 6 6 6 8 8 6 6 6 8 8 8 10 8 8 8 8 8 8 6 6 6 10 8 8 6 8 6 6 6 8 6 6 8 6 7 6 8 11 11 15 15 15 10 8 8 8 8 8 8 9 8 8 6 6 6 6 8 6 8 8 8 8 10 8 6 6 6 8 8 8 8 10 12 10 10 8 8 8 8 12 15 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 9 6 8 8 8 8 8 8 6 10 10 15 9 9 8 8 10 10 10 10 3 0 3 11 10 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 6 6 8 8 6 6 8 7 7 10 6 7 9 10 8 8 8 8 8 8 8 8 8 8 8 6 8 8 8 6 6 8 6 8 8 8 8 6 6 8 8 8 8 8 8 10 10 8 10 11 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 10 10 8 6 6 8 6 7 10 10 8 8 8 10 8 8 8 9 13 9 13 9 9 8 8 8 10 8 10 8 8 8 11 9 10 10 10 11 11 11 10 8 8 8 8 8 8 8 8 12 8 7 6 8 8 6 6 8 8 8 8 8 8 6 6 6 6 6 6 6 6 8 8 8 8 6 8 6 6 8 8 10 10 7 6 6 6 10 7 6 8 8 8 8 6 6 6 10 8 14 8 8 6 6 6 6 8 10 9 9 9 8 8 6 6 13 12 16 13 3 0 3 6 6 3 0 0 3 6 6 8 6 6 6 8 8 8 9 10 11 11 12 10 10 10 9 9 9 11 11 8 8 8 7 7 7 7 7 10 8 10 10 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 6 6 6 6 6 10 6 6 6 6 8 6 8 8 8 8 8 8 12 12 14 11 11 10 8 9 10 9 9 8 11 8 8 8 10 11 11 10 13 15 10 8 8 6 6 8 8 10 10 10 10 9 10 10 10 10 10 8 8 8 8 8 6 6 6 8 8 12 8 8 8 6 10 6 6 6 6 7 8 8 8 8 9 9 10 11 8 8 8 8 8 8 12 11 11 8 8 8 8 8 8 9 9 10 9 9 10 10 10 10 11 8 8 10 11 8 10 12 10 10 11 6 6 6 6 8 8 9 10 6 6 6 6 8 10 6 6 8 8 10 8 10 8 8 8 8 6 6 8 10 13 8 8 6 8 6 10 10 10 9 9 9 8 8 8 8 8 8 10 10 12 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 6 6 6 6 6 8 6 6 6 6 3 0 3 8 6 6 6 6 6 6 10 7 6 8 8 8 8 8 8 6 6 8 8 8 6 6 6 6 6 8 8 6 6 7 8 8 8 9 8 8 7 6 8 6 6 8 6 6 8 11 8 8 8 8 6 6 6 8 8 10 6 6 6 6 6 7 10 10 8 8 8 10 8 9 9 8 8 8 10 8 8 8 8 8 8 10 10 10 10 10 10 8 8 8 8 8 8 6 6 6 6 6 6 7 8 8 6 6 8 8 10 10 9 9 9 10 10 6 6 8 8 6 7 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no431_e12.b1 MSMg01no431_e12.b1 CHROMAT_FILE:
MSMg01no431_e12.b1 PHD_FILE: MSMg01no431_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:31 2005
         (243 letters)



>mm_chr12_118137233_118137875
          Length = 643

 Score =  420 bits (217), Expect = e-122
 Identities = 233/243 (95%), Gaps = 8/243 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagagctggtgacatgagacttgaaggaaaggatccaagctacccagggtaccctgaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagagctggtgacatgagacttgaaggaaaggatccaagctacccagggtaccctgaag 260

                                                                       
Query: 61  ttctgaggagttgattgctatggactctggtgtcatctcccagcagctctaggtgtggct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgaggagttgattgctatggactctggtgtcatctcccagcagctctaggtgtggct 320

                                                                       
Query: 121 gctgtagctgggtatttcttgtataaataagggcattgtcaacatcagaagaattctata 180
           ||||||||||||||||||||||||||||        |||||||||||||||||||||| |
Sbjct: 321 gctgtagctgggtatttcttgtataaat--------tgtcaacatcagaagaattctaga 372

                                                                       
Query: 181 cttaagtgtcctgactctatcacaagttaatcagtcatccatcatcatataacccataag 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 373 cttaagtgtcctgactctatcacaagttaatcagtcatccatcatcatataagccataag 432

              
Query: 241 aat 243
           |||
Sbjct: 433 aat 435


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space:   148356
Effective search space used:   148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information