Query= MSMg01no433_j05.b1 MSMg01no433_j05.b1 CHROMAT_FILE:
MSMg01no433_j05.b1 PHD_FILE: MSMg01no433_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:42 2005
(241 letters)
>mm_chr12_106503204_106503842
Length = 639
Score = 406 bits (210), Expect = e-118
Identities = 229/236 (97%), Gaps = 2/236 (0%)
Strand = Plus / Minus
Query: 1 ccaaaccaccacatatctgtggctagatctgatcaggaagatgcactgtgcccattagca 60
||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 434 ccaaaccgccac--atctgtggctagatctgatcaggaagatgcactgtgcccgttagca 377
Query: 61 gggcagattcgtgcagcatgtcggttagcgagcgggccactcatggagggtgacaatgag 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 376 gggcagattcgtgcagcatgtcggttagcgagcgggccactcatggagggcgacaatgag 317
Query: 121 gggagctggcactcatgctgggggttctcatttgtacatatgtttgcatttgtgtggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gggagctggcactcatgctgggggttctcatttgtacatatgtttgcatttgtgtggttt 257
Query: 181 aattttttttgcaagtacactacaatggctttgagcatgctttagtcctgctttga 236
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 256 aattttttttgtaagtacactacagtggctttgagcatgctttagtcctgctttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 639
Length adjustment: 9
Effective length of query: 232
Effective length of database: 630
Effective search space: 146160
Effective search space used: 146160
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_j05.g1 MSMg01no433_j05.g1 CHROMAT_FILE:
MSMg01no433_j05.g1 PHD_FILE: MSMg01no433_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:42 2005
(342 letters)
>mm_chr12_106346949_106347689
Length = 741
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%), Gaps = 1/342 (0%)
Strand = Plus / Plus
Query: 1 agctgggcctcatttcctgaattttgagcaagtctgtggagtctgagaggggtgctcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 170 agctgggcctcatttcctgaattttgagcaagtctgtggagtctgagagggatgctcaga 229
Query: 61 ctgtgttcagcctagaagcaacattgagctcatggacttctcagcagtagcatttgatcc 120
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 230 ctgtgttcagcctagaagcaacagtgagctcatggactactcagcagtagcatttgatcc 289
Query: 121 ttctctgggtggccccaaaggtgcttgcccatgcacgtgtgtatgcagaaggtgctcaca 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 290 ttctctgggtggccccaaaggtgcttgcccatgcacgcgtgtatgcagaaggtgctcaca 349
Query: 181 catgcacacctgtatgcacaaggtgctcacacatacacacctgtatgcacaaggtgctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 catgcacacctgtatgcacaaggtgctcacacatacacacctgtatgcacaaggtgctca 409
Query: 241 cacatgctcatcctatttctacacggtgctcacacatgtatacctgtgtgcacaaggtgc 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cacatgcaca-cctatttctacacggtgctcacacatgtatacctgtgtgcacaaggtgc 468
Query: 301 tcatacatgcacacatgtatgcacatggtatacacacatgca 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tcatacatgcacacatgtatgcacatggtatacacacatgca 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space: 243756
Effective search space used: 243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
