Query= MSMg01no433_l17.b1 MSMg01no433_l17.b1 CHROMAT_FILE:
MSMg01no433_l17.b1 PHD_FILE: MSMg01no433_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:54 2005
(424 letters)
>mm_chr12_76861526_76862349
Length = 824
Score = 462 bits (239), Expect = e-134
Identities = 277/299 (92%), Gaps = 17/299 (5%)
Strand = Plus / Minus
Query: 111 agct-agtagtatgacacagaaagagatttctaaagagctggcagtttagttgtagggtc 169
|||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 494 agctcagtagtatgacacagaaagagatttctcaagagctggcagtttagctgtagggtc 435
Query: 170 aggcttgtaaatagattcttcatatgtagttaagaaaataaagataacctcgctcagcta 229
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aggcttgtaaataaattcttcgtatgtagttaagaaaataaagataacctcgctcagcta 375
Query: 230 gcaggtttttacctcagtttatgccccagccctacctctttagaggtaaaaatataagtt 289
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gcaggtttttacctcagtttatgccccagccctacctctttagaggta------------ 327
Query: 290 aaatataagttaaatagataaatattacaaaacaactacacaaagataaacaaaaagtcc 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaatataagttaaatagataaatattacaaaacaactacacaaagataaacaaaaagtcc 267
Query: 350 cttctatcttatttaggg----tgttgctgtgggagacaccatgacctcaacaattctt 404
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 266 cttctatcttatttagggtttctgttgctgtgggagacaccatgacctcagcaattctt 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_l17.g1 MSMg01no433_l17.g1 CHROMAT_FILE:
MSMg01no433_l17.g1 PHD_FILE: MSMg01no433_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:54 2005
(415 letters)
>mm_chr12_76698496_76699310
Length = 815
Score = 803 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 1 cagtctggttcctggcttcaagtaacttatatttccatacttcagtctttagaaatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtctggttcctggcttcaagtaacttatatttccatacttcagtctttagaaatgttt 260
Query: 61 aatatcctagccaagcagagcatgtttcttcaacgtctgattggtaaatgcaaaattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatatcctagccaagcagagcatgtttcttcaacgtctgattggtaaatgcaaaattaaa 320
Query: 121 accaagaaagattttgaagccaactcaatttcccttggcaacagttgaaccgttaaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaagaaagattttgaagccaactcaatttcccttggcaacagttgaaccgttaaaaag 380
Query: 181 tagtgcacgtttgaaatgctcacagctgttgcttagaacatttcacattttgtagagtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtgcacgtttgaaatgctcacagctgttgcttagaacatttcacattttgtagagtga 440
Query: 241 ggattttgcttgcaaattatggatggctataaagacaattcatttcaaagtcatttcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggattttgcttgcaaattatggatggctataaagacaattcatttcaaagtcatttcatt 500
Query: 301 ttctataaaatagctgagcaactgagatgaggaggtcttttttaatatgggaacatcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctataaaatagctgagcaactgagatgaggaggtcttttttaatatgggaacatcctt 560
Query: 361 gcctgtgtgaggtttgttctcggggccaagaatctcataagatctacagagccca 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctgtgtgaggtttgttctcggggccaagaatctcataagatctacagagccca 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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