Query= MSMg01no435_c20.b1 MSMg01no435_c20.b1 CHROMAT_FILE:
MSMg01no435_c20.b1 PHD_FILE: MSMg01no435_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:49 2005
(355 letters)
>mm_chr12_51619388_51620144
Length = 757
Score = 613 bits (317), Expect = e-180
Identities = 343/353 (97%), Gaps = 4/353 (1%)
Strand = Plus / Minus
Query: 5 gaattcagtttgtgtcactttggggaatataaacattgtttctctgtcatatgtctttga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gaattcagtttgtgtcactttggggaatataaacattgtttctctgtcatatgtctttga 497
Query: 65 aatgatatcatatgttctgagaactcaatggggtatcgagagtgccagaatttgctagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aatgatatcatatgttctgagaactcaatggggtatcgagagtgccagaatttgctagag 437
Query: 125 gagaaatacatatgtataactattatagatgaagatatgactctatagaaatgagatttt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 436 gagaaatacatatgtataactattatagatgaagatatgactctatagaaatgaga-ttt 378
Query: 185 ttttctcattaggtttccaataaagttaggtcacaattaaggaataacggtagaattaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttttctcattaggtttccaataaagttaggtcacaattaaggaataacggtagaattaac 318
Query: 245 aattttccc---tttttttttttctggaagtgtttatgagttactaagtggcttggtcat 301
||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||
Sbjct: 317 aatcttcccttttttttttttttctggaagtgggcaggagttaccaagtggcttggtcat 258
Query: 302 gatcatgattgggttgtaaaggaaaagctgtttacaaagtgtcaaggaagtcc 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gatcatgattgggttgtaaaggaaaagctgtttacaaagtgtcaaggaagtcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 757
Length adjustment: 9
Effective length of query: 346
Effective length of database: 748
Effective search space: 258808
Effective search space used: 258808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_c20.g1 MSMg01no435_c20.g1 CHROMAT_FILE:
MSMg01no435_c20.g1 PHD_FILE: MSMg01no435_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:49 2005
(368 letters)
>mm_chr12_51546667_51547434
Length = 768
Score = 530 bits (274), Expect = e-155
Identities = 334/370 (90%), Gaps = 29/370 (7%)
Strand = Plus / Plus
Query: 1 ctgaaggtattaccattcctactttcaagttatatatgaagataaataagctatgaaagt 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaaggtattaccatccctactttcaagttatatatgaagataaataagctatgaaagt 260
Query: 61 tgtcgtagatgagaaacagccaaagaactcatagaaggtttagaatggagtggggcagga 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 tgtcgtagatgaggaacagccaaagaactcatagaaggtttagaatggagtggggca-ga 319
Query: 121 gtttaaaggttcactgggcagtcaccagcttaacagcagaaaacaaagccaggtgaactg 180
||| || || ||||||||||||||||||||||||||
Sbjct: 320 ----aaa------------------ca----aagagcagaaaacaaagccaggtgaactg 353
Query: 181 taaggacctctacagcttcatccccagtatggcaacca--ttgaccacatagcgatattc 238
||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||
Sbjct: 354 taaggacctctacagcttcatcctcagtatggcaaccattttgcccacatagcgatattc 413
Query: 239 ttaaatttatgaaagtacaggatccccttcttcagacataagttcaagttctctatgggc 298
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttaaatttaagaaagtacaggatccccttcttcagacataagttcaagttctctatgggc 473
Query: 299 acaagtgacagtggatacaacgttgggaagcacagaacattgctttccaggtttcagaaa 358
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 474 acaagtgacagtggatacaacgttgggaagtacagaacattgctttccaggtttcagaaa 533
Query: 359 gttgtgctgt 368
||||||||||
Sbjct: 534 gttgtgctgt 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
