Query= MSMg01no435_g13.b1 MSMg01no435_g13.b1 CHROMAT_FILE:
MSMg01no435_g13.b1 PHD_FILE: MSMg01no435_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:08 2005
(461 letters)
>mm_chr12_83984814_83985674
Length = 861
Score = 725 bits (375), Expect = 0.0
Identities = 390/395 (98%), Gaps = 1/395 (0%)
Strand = Plus / Minus
Query: 5 gaattctctctatagcatgctggcatctaactttaaaatgctgaatgcaagcaatggaga 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gaattctctctagagtatgctggcatctaactttaaaatgctgaatgcaagcaatggaga 335
Query: 65 gagacagggtggatcagaggaatgggcagagtaagcttcttccaaagagactttgtaggg 124
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 334 gagacagggtggatcagaggaatggacagagtaagcttcttccaaacagactttgtaggg 275
Query: 125 ttttctgagaggtgtatgtctcatgctaacatggaagattagtcaaatgtaaagacttgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttttctgagaggtgtatgtctcatgctaacatggaagattagtcaaatgtaaagacttgg 215
Query: 185 acatttgacccatctgaattctcacaaatgtctccagtccaatcttcatggccctgttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 acatttgacccatctgaattctcacaaatgtctccagtccaatcttcatggccctgttct 155
Query: 245 tttcctcctatgtcctaactttcacttaagaaaactataagtctgtgaattgagcctgaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tttcctcctatgtcctaactttcacttaagaaaactataagtctgtgaattgagcctgaa 95
Query: 305 ttataagtgaacatgttgtgggatccaacatgaaatggacagtttcttcaaccctgtggc 364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ttataagtgaacat-ttgtgggatccaacatgaaatggacagtttcttcaaccctgtggc 36
Query: 365 tacaggagatgataatggttttggccagccatcaa 399
|||||||||||||||||||||||||||||||||||
Sbjct: 35 tacaggagatgataatggttttggccagccatcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_g13.g1 MSMg01no435_g13.g1 CHROMAT_FILE:
MSMg01no435_g13.g1 PHD_FILE: MSMg01no435_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:08 2005
(241 letters)
>mm_chr12_83812358_83812998
Length = 641
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%)
Strand = Plus / Plus
Query: 1 cacacttgacacttgaccacctatggctcctgagaggcacaatcctttgggggacagttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacttgacacttgaccacctatggctcctgagaggcacaatcctttgggggacagttg 260
Query: 61 ataatttacgttttcctttagtgtggtggaagatttgtttgggacagcaaggaaagaaaa 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataatttacgttttcatttagtgtggtggaagatttgtttgggacagcaaggaaagaaaa 320
Query: 121 ctcttggttttaagagtcagaaaattctggatttgacccaaactatatttagatactatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcttggttttaagagtcagaaaattctggatttgacccaaactatatttagatactatt 380
Query: 181 tccccaggccaaggggcaatcatggagaaaacaaacaataaatgctagataggatgcagg 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 tccccaggccaaggggcaatcatgaagaaaacaaacaataaatgctagataggatgcagg 440
Query: 241 g 241
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
