Query= MSMg01no435_n17.b1 MSMg01no435_n17.b1 CHROMAT_FILE:
MSMg01no435_n17.b1 PHD_FILE: MSMg01no435_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:45 2005
(411 letters)
>mm_chr12_31843698_31844512
Length = 815
Score = 729 bits (377), Expect = 0.0
Identities = 404/415 (97%), Gaps = 4/415 (0%)
Strand = Plus / Minus
Query: 1 aagggttcgttctgcttttaggaaatgcagcaacat----taaaaaaaaatccatcttct 56
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 615 aagggttcgttctgcttttaggaaatgcagcaacataaaaaaaaaaaaaatccatcttct 556
Query: 57 cggaaatcgaaaactaaacatttaaagtacttgagcaaagtttattccataatgactaga 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cggaaatcgaaaactaaacatttaaagtacttgagcaaagtttattccataatgactaga 496
Query: 117 cgattttaacttgctaatgcattggaagagggacaaagaaagaaatctcgtacctgtaga 176
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 495 cgattttaacttgctaatgcattgggagagggacaaagaaagaaatctcgtacctgtagg 436
Query: 177 gactaaagttaatctgtaagccccacttgacaaggacaggtaagttcctggaatgctata 236
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gactaaagttaatctgtaagtcccacttgacaaggacaggtaagttcctggaatgctata 376
Query: 237 ggctattgtacctgtacgacaatgagtcacatgttttcactctggtaaacaagggctgct 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggctattgtacctgtacgacaatgagtcacatgttttcactctggtaaacaagggctgct 316
Query: 297 tgccccaactgcacaggatgctcttgtccacatgtaggtgggaggcacataggcaggaag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgccccaactgcacaggatgctcttgtccacatgtaggtgggaggcacataggcaggaag 256
Query: 357 ttcatcaggatgtatgcttgtccccactggaccacagacgaaagtaccatagcct 411
| || ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 255 tacaccaggatgtatgcttgtccccactggaccacagaggaaagtaccatagcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 815
Length adjustment: 9
Effective length of query: 402
Effective length of database: 806
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_n17.g1 MSMg01no435_n17.g1 CHROMAT_FILE:
MSMg01no435_n17.g1 PHD_FILE: MSMg01no435_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:45 2005
(394 letters)
>mm_chr12_31609357_31610150
Length = 794
Score = 665 bits (344), Expect = 0.0
Identities = 386/408 (94%), Gaps = 14/408 (3%)
Strand = Plus / Plus
Query: 1 agctatgtatctttgaaatcaaagctctgtcacaagctgtcttttagtcattgctgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 agctatgtatctttgaaatcaaagctctgtcacaagctgtcttttagtcattgctatttt 260
Query: 61 gtttgtttgcagcccacgtgattgcaaaagctaaaggtcttgcagttttgtctgtgatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgtttgcagcccacgtgattgcaaaagctaaaggtcttgcagttttgtctgtgatta 320
Query: 121 aagccgggtttctggtcacagccaggggaggcagtgggattgtcctggcacgtcttccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 aagccgggtttctggtcacagccaggggaggcagtgggattgtcctggcgcgtcttccgg 380
Query: 181 atggaagtaagttgatacttgaagagacctaacatcttctgtgttctgcatctgtctggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggaagtaagttgatacttgaagagacctaacatcttctgtgttctgcatctgtctggt 440
Query: 241 ctcatatttagtatgaccagtgtgaatgccacctgtgctccttctaaagcatgcagtatg 300
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ctcatagggagtatgaccagtgtgaatgccacctgtgcttcttctaaagcatgcagtatg 500
Query: 301 tgtcaggaagagcagggaagctggccttagattattcctaggccattactcaaggcgtat 360
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 501 tgtcaggaagagcagggaagctggccttagattattgctaggtcattactcaaggcgtat 560
Query: 361 ctgactgttc----------tg----ccttccattagaacgctttctt 394
|||||||||| || ||||||||||||||||||||||
Sbjct: 561 ctgactgttccattacattttgtaggccttccattagaacgctttctt 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
