NACCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCC
GCGGAATTCTAACAAGTTATCTCATCTCATGATAGCTAAGCAAACACTGG
AACAGTGATTAAATGTCTGTGACAGATTTGACTTTATAGTCGGTCTATAT
TCACATCTCACATTTTGAATTCTTTATTGCTAATATAAACCAAACAAAAC
ATCTTTTTTTTTTTTTGGATATGCTACCTGTTACTTGTGGTATGCAAACA
CAGTAAGAATACAACCCCACTCTCAATTACTAAAATCAGGGACAATAGAA
TGCTCCCACAAATGTACAATCTATACTAGGGTAGTATAAGTTTTAAACCA
TGTTAAAGTTTAGGATTTAAATAACACTATTTATTGACTGTGATTATTTT
TTATCTAGTTCTTTTTTTTTACACACTTTACATATCATATCCTAATGAAT
TTTTCTTAAGCCTCTCTTCAAATGCTTAATCCATTTCAAAAACTAACTAA
AGATGCATAAATGAAAATATCAGCTTTAACATATTTTCAAGTATTTTTTT
CTCTGTTTCTTTGTTTCCTATATTTTAAAAATGACTTTGCTATCAGCATT
AAATGAACAAAAACCAACACTATAGGGAATAACCACATGCTTTTTTCACT
TTTACAAGCACTTTGCCCTCCCTCTTTGTATAGTGACTTGATCATTTTTA
TTACAATTTAATCTCTTTACTTATCTTTAATCCTATCATACCGAATTT

NNCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCATTCATAGGCACCAA
AAGCTAACACTATTACTGCTGCCATATTGTGCTTGGAGACAGGAGCCTAG
CAAGGCTGTCCATAGCAGAGCCTCTACCAGCAACTGACACATGCAGATAC
TTAGAGCCAAGCATTGGACTGAGGCCAGGGACCTCTATGGAAGACTTAGG
GGAAGGATTGAAGGAGCTGAAGGGGATGGCGACCCTTAGGAAAAATAACT
CACCTTGACCCCTGGGAGCTCTCAGATTTTTTTCCACCAACCAAAGAGCA
TATATAGGCTGGTTTGAGGCTCCTGGCACATATGTAGCAGAAGGCTGCCT
TGTCTGGCCTCAGTAGAAGAGTCTGCGCTAATACTGTAGAGACTTGATGC
TCCAGGGGAGGAGGATGCTGGTGGCGTTTAAGCTGTTTCCCCTCCCTTCT
TTCCTTTCCCTTCTCTTTTCTCCTCCTCCTCTTTCCCCCCCTTGTTTTCC
TTTCTCTCATCTCTTTCTTTTCCCCTTTCTCCTTATCTTTTTCCTTTGCT
CTTCCCCGCTTCTTCTGACCTCTTTCCCTCCCTTCATTCATTTTTCCCTT
ATCCTTATCTTTCCTCATCACCTCTCTCTCTTTTTTTCTCTTCTCTATCT
GTTCCTCTTTCATTTTCTTTCCCCTTCCTCCTCTTCTTTTCTCTTCTTTC
TACACTCCCCCCT

Query= MSMg01no437_i12.b1 MSMg01no437_i12.b1 CHROMAT_FILE:
MSMg01no437_i12.b1 PHD_FILE: MSMg01no437_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:57 2005
         (551 letters)



>mm_chr12_95372333_95373284
          Length = 952

 Score =  963 bits (498), Expect = 0.0
 Identities = 538/562 (95%), Gaps = 18/562 (3%)
 Strand = Plus / Minus

                                                                       
Query: 8   gaattctaacaagttatctcatctcatgatagctaagcaaacactggaacagtgattaaa 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 gaattctaacaagttatctcatctcatgatagctaagcaaacactggaacagtgattaaa 860

                                                                       
Query: 68  tgtctgtgacagatttgactttatagtcggtctatattcacatctcacattttgaattct 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 tgtctgtgacagatttgactttatagtcggtctatattcacatctcacattttgaattct 800

                                                                       
Query: 128 ttattgctaatataaaccaaacaaaacatc-----------------ttttttttttttt 170
           ||||||||||||||||||||||||||||||                 |||||||||||||
Sbjct: 799 ttattgctaatataaaccaaacaaaacatctttttttttttttttttttttttttttttt 740

                                                                       
Query: 171 ggatatgctacctgttacttgtggtatgcaaacacagtaagaatacaaccccactctcaa 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ggatatgctacctgttacttgtggtatgcaaacacagtaagaatacaaccccactctcaa 680

                                                                       
Query: 231 ttactaaaatcagggacaatagaatgctcccacaaatgtacaatctatactagggtagta 290
           |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 679 ttactaaaatcagggacagtagaatgctcccacaaatgtacaatctatacaagggtagta 620

                                                                       
Query: 291 taagttttaaaccatgttaaagtttaggatttaaataacactatttattgactgtgatta 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 taagttttaaaccatgttaaagtttaggatttaaataacactatttattgactgtgatta 560

                                                                       
Query: 351 ttttttatctagttc-tttttttttacacactttacatatcatatcctaatgaatttttc 409
           ||||||||||||||| |||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 559 ttttttatctagttcttttttttttagaaattttacatatcatatcctaatgaatttttc 500

                                                                       
Query: 410 ttaagcctctcttcaaatgcttaatccatttcaaaaactaactaaagatgcataaatgaa 469
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttaagcctctcttcaaatgcttaatccatttcaaaaactaactaaagatgcataaatgaa 440

                                                                       
Query: 470 aatatcagctttaacatattttcaagtatttttttctctgtttctttgtttcctatattt 529
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 439 aatatcagctttaacatattttcaagtatttttttctctgtttctttgtttcttatattt 380

                                 
Query: 530 taaaaatgactttgctatcagc 551
           ||||||||||||||||||||||
Sbjct: 379 taaaaatgactttgctatcagc 358


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 952
Length adjustment: 10
Effective length of query: 541
Effective length of database: 942
Effective search space:   509622
Effective search space used:   509622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)