Query= MSMg01no437_l01.b1 MSMg01no437_l01.b1 CHROMAT_FILE:
MSMg01no437_l01.b1 PHD_FILE: MSMg01no437_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:09 2005
(517 letters)
>mm_chr12_43313270_43314186
Length = 917
Score = 690 bits (357), Expect = 0.0
Identities = 376/385 (97%), Gaps = 5/385 (1%)
Strand = Plus / Minus
Query: 138 acaggagtgactatggcatgccttactccaaatttaaagacatcagaaccagggaagtga 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 acaggagtgactatggcatgccttactccaaatttaaagacatcagaaccagggaagtga 858
Query: 198 tgtaatttaatttaactcaatcaggtgaaagatttgagaacctggtgaatagatgat--- 254
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tgtaatttaatttaactcaatcaggtgaaagatttgagaacctggtgaatagatgataca 798
Query: 255 --acctggagaccaaaggctagtgaatagaaaattcttatgttcaaggacattaggagac 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aaacctggagaccaaaggctagtgaatagaaaattcttatgttcaaggacattaggagac 738
Query: 313 actagtcccaggacagagagatgtggggaaagagcagggagggaacaaaagatagtataa 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 737 actagtcccaggacagagagatgtggggaaagagcagggagggaacaaaagatagtagaa 678
Query: 373 gacgacaagatagtaacaaggattccactgggaatctggctaaattgcgtttatattgta 432
|| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 677 gatgagaagatagtaacaaggattccactgggaatctggctaaattgtgtttatattgta 618
Query: 433 ttctgaaaaagaacctatctgatgttgaatgtacaactaacattaatttgacaaatgact 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttctgaaaaagaacctatctgatgttgaatgtacaactaacattaatttgacaaatgact 558
Query: 493 tataagacagtgtacaatttaggct 517
|||||||||||||||||||||||||
Sbjct: 557 tataagacagtgtacaatttaggct 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_l01.g1 MSMg01no437_l01.g1 CHROMAT_FILE:
MSMg01no437_l01.g1 PHD_FILE: MSMg01no437_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:10 2005
(417 letters)
>mm_chr12_43155332_43156147
Length = 816
Score = 710 bits (367), Expect = 0.0
Identities = 406/421 (96%), Gaps = 5/421 (1%)
Strand = Plus / Plus
Query: 1 cttctcatggagctgttactggggaaactaaggcaaaagactgcaaaggatatatggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctcatggagctgttactggggaaactaaggcaaaagactgcaaaggatatatggtta 260
Query: 61 aagacagaaccagagacagcttattaaaaagggaaaaacatgctctagaatggaagtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagacagaaccagagacagcttattaaaaagggaaaaacatgctctagaatggaagtata 320
Query: 121 gagtgacccgaggaaagagcacagaaatccccaagtcataaggcccacgaccctttattg 180
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 gagtgacctgaggaaagagcacagaaatccccaagtcataaggcccatgaccctttattg 380
Query: 181 aatatttgtttagcacctacttctctcatttatatttaagaagtttcgtggtgtatgtta 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacatttgtttagcacctacttctctcatttatatttaagaagtttcgtggtgtatgtta 440
Query: 241 tgttttccagattatattccacctaaggaaaagcttccagccttcctttaaaagtacttt 300
|||||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 tgttttccagatgaaat-ccacctaaggaaaagcttccagccttcctttaaaagtacctt 499
Query: 301 ctgttacattttaagtttttgttgttgtttcaaagttttaattttttattttatgtatat 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgttacattttaagtgtttgttgttgtttcaaagttttaattttttattttatgtatat 559
Query: 361 gaatgtttcatacaaatatgtttatgtgaacactcatacactca----tgtatatatata 416
|||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 560 gaatgtttcatataaatatgtttatgtgaacactcatacacacacatgtgtatgtatata 619
Query: 417 t 417
|
Sbjct: 620 t 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 816
Length adjustment: 9
Effective length of query: 408
Effective length of database: 807
Effective search space: 329256
Effective search space used: 329256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
