Query= MSMg01no438_l08.b1 MSMg01no438_l08.b1 CHROMAT_FILE:
MSMg01no438_l08.b1 PHD_FILE: MSMg01no438_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:35 2005
(503 letters)
>mm_chr12_47428405_47429307
Length = 903
Score = 833 bits (431), Expect = 0.0
Identities = 482/499 (96%)
Strand = Plus / Minus
Query: 5 gaattccattagtctttctggctggtattttagactaaagcaagttaaaataggcagaac 64
|||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 703 gaattccattagtcattctggctggtattttagactaaagtaagtaaaaataggcagaac 644
Query: 65 caagcaagtcctgtgactcataagctgtttccttatttcaaaaataccagtccctttgtg 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 caagcaagtcctgtgaatcataagctgtttccttatttcaaaaataccagtccctttgtg 584
Query: 125 gaagtcatctgggatccccactctgtgagtttatgaaaacattggagatattcattagat 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 583 gaagtcatctgggatccccactctgtgagtttatgaaaacattggagatattcattggat 524
Query: 185 attcaattcattccatcatatagaatcatcatttttataaatatcatatcattaaccatc 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 attcaattcattccatcgtatagaatcatcatttttataaatatcatatcattaaccatc 464
Query: 245 atcacacagaacagaattcaaaatgtatataagctttatgccatctctcaagaaataata 304
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 463 atcacacagaacagaattcaaaatgtatataagctttatgccatctctcaggaaataatt 404
Query: 305 ggagaaaacagtggactggcttggtccaaaagaatgacctcaatcgagattcagtctaga 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 403 ggagaaaacagtggactggcttggtccaaaagaatgacctcaatcgagattctgtctaga 344
Query: 365 atagcagcgcccgccactattgatctctaaatgccttcagcctgtcactacagtgtttct 424
||||||| | | |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 343 atagcagtgtttgtcactattgatctctaaatgccttcagcctgtcaccacagtgtttct 284
Query: 425 taagccaacaagtctgtgcttgcacttgtagaggatcatttctatgttctaagacttttg 484
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 283 tcagccaacaagtctgtgcttgcacttgtagaggatcatttctatgttctaggacttttg 224
Query: 485 ctactgtttggacattttt 503
|||||||||||||||||||
Sbjct: 223 ctactgtttggacattttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_l08.g1 MSMg01no438_l08.g1 CHROMAT_FILE:
MSMg01no438_l08.g1 PHD_FILE: MSMg01no438_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:35 2005
(312 letters)
>mm_chr12_47293286_47293997
Length = 712
Score = 530 bits (274), Expect = e-155
Identities = 301/310 (97%), Gaps = 2/310 (0%)
Strand = Plus / Plus
Query: 1 tctgaagaaaag-tataaatgttcttgacatttgaaaaagttacagtatactcaatcaac 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaagaaaagttataaatgttcttgacatttgaaaaagttacagtatactcaatcaac 260
Query: 60 tgccacactcagtttttcttacagtagctgagtatctgagaaatttcagctaagggaaaa 119
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 261 tgccacactcagtttttcttacattagctgagtatctgagaaatttcagctaaggg-aaa 319
Query: 120 aaaatcacaaacattgacttatgtagctcttgacagatgcattaatagataaaaacaaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaatcacaaacattgacttatgtagctcttgacagatgcattaatagataaaaacaaac 379
Query: 180 aaagggcataatgtatttttatgaaaattgagggaattttaaaaatagcacctcagataa 239
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 380 aaagggcataatgtatttttatgaaaattgagtgaattttaaaaatagcacatcagataa 439
Query: 240 ttctatgtcacttattatagactgtccttgggctttttcttggagcgccttcctctttcc 299
|||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 ttctatgtcacttaggagagactgtccttgggctttttcttggagtgccttcctctttcc 499
Query: 300 ttttttctta 309
||||||||||
Sbjct: 500 ttttttctta 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
