Query= MSMg01no438_n21.b1 MSMg01no438_n21.b1 CHROMAT_FILE:
MSMg01no438_n21.b1 PHD_FILE: MSMg01no438_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:48 2005
(462 letters)
>mm_chr12_57671810_57672671
Length = 862
Score = 613 bits (317), Expect = e-180
Identities = 326/329 (99%)
Strand = Plus / Plus
Query: 134 aggttacataatttttatatctttacttgaatctatactaaatgataagtacatttcaca 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aggttacataatttttatatctttacttgaatctatactaaatgataagtacatttcaca 393
Query: 194 ctatactctattttaaaaacaaaattactatattttgcaagcagataaatgcctgcctaa 253
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctatactcaattttaaaaacaaaattactatattttgcaagcagataaatgcctgcctaa 453
Query: 254 cagtttttgtttggattattatttcatcattctccatttttcttttataattaatattga 313
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 454 cagtttttgtttggattattatttcatcactctccatttttcttttataattaatattga 513
Query: 314 aatagttaagtccatgagtataaattcatttttattattatccccttgtgatagattaga 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aatagttaagtccatgagtataaattcatttttattattatccccttgtgatagattaga 573
Query: 374 attaagactacaagattgaaataattcagattttcgtggatctgaacgagccactttgta 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 attaagactacaagattgaaataattcagattttcgtggatctgaacgagccactttgta 633
Query: 434 aaatcctgcatcactttgtatttctctta 462
|||||||||||| ||||||||||||||||
Sbjct: 634 aaatcctgcatcgctttgtatttctctta 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_n21.g1 MSMg01no438_n21.g1 CHROMAT_FILE:
MSMg01no438_n21.g1 PHD_FILE: MSMg01no438_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:48 2005
(365 letters)
>mm_chr12_57814727_57815490
Length = 764
Score = 683 bits (353), Expect = 0.0
Identities = 362/365 (99%), Gaps = 1/365 (0%)
Strand = Plus / Minus
Query: 1 tttcttgaatacacccaaagatgatgccaattatgtctggaaaagagaaatctattgtct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 564 tttcttgaatacacccaaagatgatgccaattatgtctggaaaagagaaatctattgtgt 505
Query: 61 agatgtgaggaatctgaacattttcttttgcagaaaagtcccatgccttttttttgacta 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 504 agatgtgaggaatctgaacattttcttttgcagaaaagtcccatgcc-tttttttgacta 446
Query: 121 aatatgtctttatttatttacttttttttcaattgaaagttcttgaaaaagaatctgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatatgtctttatttatttacttttttttcaattgaaagttcttgaaaaagaatctgatg 386
Query: 181 agaaatgatgaaagttgcaaaaactcagagggaaaaatgtatttggagactcaagatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaaatgatgaaagttgcaaaaactcagagggaaaaatgtatttggagactcaagatggt 326
Query: 241 cttgattttgccctgagaattttccataatcgttttctatctgtgtatcagagccaatga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 cttgattttgccctgagaattttccataatcgttttctatctgtgtatcagagccactga 266
Query: 301 tgattctgaaagtccccagtctccccaataaggccccctgagacttggtggcccagggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgattctgaaagtccccagtctccccaataaggccccctgagacttggtggcccagggtt 206
Query: 361 ggggg 365
|||||
Sbjct: 205 ggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 764
Length adjustment: 9
Effective length of query: 356
Effective length of database: 755
Effective search space: 268780
Effective search space used: 268780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
