Query= MSMg01no439_a06.b1 MSMg01no439_a06.b1 CHROMAT_FILE:
MSMg01no439_a06.b1 PHD_FILE: MSMg01no439_a06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:00 2005
(531 letters)
>mm_chr12_90530840_90531770
Length = 931
Score = 932 bits (482), Expect = 0.0
Identities = 519/536 (96%), Gaps = 10/536 (1%)
Strand = Plus / Minus
Query: 5 gaattcagcatat-ttcgatcagatacaatttaatgagagtgatagaaaagatgcacaaa 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gaattcagcatatgtt-gatcagatacaatttaatgagagtgatagaaaagatgcacaaa 651
Query: 64 gcttctccctacatcctccctaaaatgtgcattttcttcattcatacaaggagaatacag 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 650 gcttctccctacatcctccctaaaatgtgcattttcttcaatcatacaaggagaatacag 591
Query: 124 gtgttgcctgatatattaaaatgaacatgaaagaatgtgaataagaatgatcatcaatac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gtgttgcctgatatattaaaatgaacatgaaagaatgtgaataagaatgatcatcaatac 531
Query: 184 agatcatcaatacagatcattaatacagatcatcaatggagatcattgatgcagaataag 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 530 agatcatcaatacagatcattaatacagatcatcaatggagatcatcgatgcagaataag 471
Query: 244 gactggatccaagctggaatgacagaaagcccttccacgagtaaaacctttggatgacgt 303
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 470 gactggatccaagctggaatgacagaaagcccttccatgagtaaaacctttggatgacat 411
Query: 304 catgagggatggggagacacatcagcataggaaggaaaagctgaggaggcagagaagatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 catgagggatggggagacacatcagcataggaaggaaaagctgaggaggcagagaagatc 351
Query: 364 attaaggagagaggcaaccctcactttaagagaagatgcttgtgtcagaagggtgaactt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 attaaggagagaggcaaccctcactttaagagaagatgcttgtgtcagaagggtgaactt 291
Query: 424 catgtttcagagcaatcagctagtagaagtataataaaggattagtataaaatagcttag 483
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 290 caagtttcagagcaatcagctagtagaagtataatgaaggattagtataaaatagattag 231
Query: 484 ttttcaaattagggttgtgtcttgat--------atattctacagaacttatgaaa 531
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 230 ttttcaaattagggttgtgtcttgatgcaatggcatattctacagaacttatgaaa 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_a06.g1 MSMg01no439_a06.g1 CHROMAT_FILE:
MSMg01no439_a06.g1 PHD_FILE: MSMg01no439_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:00 2005
(293 letters)
>mm_chr12_90379768_90380460
Length = 693
Score = 497 bits (257), Expect = e-145
Identities = 284/297 (95%), Gaps = 8/297 (2%)
Strand = Plus / Plus
Query: 1 agtattaacttagaacaaaatctttctgagtgtcatgagatccagcccttctgatagtat 60
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 agtattaacttaaaacaaaatctttttgagtgtcatgagatccagcccttctgatagtat 260
Query: 61 gtgggaaaggcaagaacaacctgccttctgatagggctgctaattcagctgccaatgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgggaaaggcaagaacaacctgccttctgatagggctgctaattcagctgccaatgggc 320
Query: 121 tttgtgagatcctctttattctgttttgttgttgatgttttgttttgtgttgttttgttt 180
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 321 tttgtgagatcctctttattctgttttgttgttgatgtttcgttttgtattgttttgttt 380
Query: 181 taattgaagcctagaggagttcagatgcttactgggcagagggaatgggtacttcgatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 taattgaagcctagaggagttcagatgcttactgggcagagggaatgggtacttcaatta 440
Query: 241 ----tttttgtagttgtctcaatgtgggaatgcccaaagaaacctcattagccctca 293
| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggact----gtagttgtctcaatgtgggaatgcccaaagaaacctcattagccctca 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|