ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTAGAGTTATCCCAATTAATAGCATTATTTTTTAAATAATCCTTAAAG
TAAGAGAGAGACAGAGAGAGAGAGGGGAAATAAAACAAAATAGTAAAAGT
AAAAAAAGTCATTAACAGTAAATAAAATTGTTTAATTATACGAAATTCTG
TTACCATACTATGTTTGGAAGCACTTGGTTTTTGTCATTATTGTTTACTT
GTGATCAACTTAAGGTGACTTACTGGTTAGCCAGAAACACCTTCATGCTA
AATTGAGAAAAAATGAAAAAAAGAAAAGGAATCAAAGGGAATGAAGTGAC
TTGTTAAACTTTAGCAAAACCTTTTGAGTACATTGACCAAAATAAAGCCT
TTATCTAAACAATTAGAACCATTGCTTATTTTGTTAGCACCAAAACATAC
AAAGAGATTGACTATGCATATGAGTTTAAATCCTGGATGTATTCCATGAC
CCTTTACTTTTCTACTATGCCTGTGAGTAGTAAACACATCTTTTTAAGGT
CGCAAACACTTGCATCCTCAATGTCAGTCACGCTTGGTTAAAAATAAACA
TGCTTGAAAAAGCTGAGTCTAATCTTTCAAAATTTCACCCCCCCCGCCAA
AAGACCCCAAGAAAAAAAACCACTTTGGAGAAACATGGTCCCACTTGCAA
AAGGAAAAATTTCCGAAGACCCTCCCCTGCAAATTTAAAAAAAAAACTAT
TTTTCTTT

GCCTTCTTGCTTCCTCTCGTGGTTCCGGTTTTTCCTACTAGATGTTCCTT
TTTAGCAAATATTTTTCCGCGCATTTTTCGCGAAAGGAAAGGTGGGGCTA
AGGTTCCTGGGTGGGTCCGACCCGGGGTTTTGTTCGCCACAATATTAGGG
TTGTAACAACCTTAATTTAGGAAAAGGGTATTCCCGCCGCGGTTAAATTT
TCAATTTTCCCCAATGTTAAAAAAAAATGGGTTGGGGAAACCCCCTTCCT
TTTTTAATTACCCAAACCAGGCCCAATTTTTTAAATAAACTTTTTTGGGG
GCTTTCCCCCTTTTTTCTTAATAATTATATAGATTTTAAAAAAATTAACC
CCACCATCCCCTCCCCAATTTCCCGTTTATCAATACATGGGGGAAAATGG
GGTTTAACCCCTTATAACGGCTTTATAAAAACTTCTCCTATATACACCCT
AGGGGGGGTGGGGAAATTAAACTGTCCTGTTATTATTTTGTGGGCCTCCC
CCCAACGTATGAAGTTCTTTTAGAAGAAAAAAAAAACTTTCGTGGGGGTC
ACCTGTGGGCCTTCTTTTTCCTCCCCCCCTGGGGTGGGCTACCCCTTCTT
CGCGGGAGTAATTTTCTCCCATCGTTTTCTCCCCTTTTCTGTTCTTTCCG
CCCCCACTCCCTTTTTTCTCTGCTTTTTCTCCTGTGTTCTCTCCCCCTTA
TCGCTTTTTCATTATTTAGAGTAGTGGTTTTAAATTCCTCTCGCGGAGAT
GTTTTCACGGTTTTCCCTCGTGTTTGTCTCTCCCTATATAATCTCCTCTT
TCAGTTAATTATATTCCCACCTTACCTTTTTCCCTCTGTCTTTTTTCCTC
TCCCTCTGTGTGCTTGTGAAGAACTTAGTTTTGTCCACAGTTTTACAATA
TCTTCTAAAACATAAT

Query= MSMg01no439_g20.b1 MSMg01no439_g20.b1 CHROMAT_FILE:
MSMg01no439_g20.b1 PHD_FILE: MSMg01no439_g20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:33 2005
         (477 letters)



>mm_chr12_39938031_39938906
          Length = 876

 Score =  789 bits (408), Expect = 0.0
 Identities = 467/506 (92%), Gaps = 35/506 (6%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctagagttatccc-aattaatagcattattttttaaataatccttaaagt--aag 61
           |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||
Sbjct: 763 gaattctagagtta-cccaaattaatagcattattttttaaataatccttaaagtaaaag 705

                                                                       
Query: 62  agagagacagagagagagag-----------------------------g-ggaaataaa 91
           ||||||| ||||||||||||                             | |||||||||
Sbjct: 704 agagagagagagagagagagagagagagagagagagagagagagagagagaggaaataaa 645

                                                                       
Query: 92  acaaaatagtaaaagtaaaaaaagtcattaacagtaaataaaattgtttaattatacgaa 151
           |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 644 acaaaatagtaaaagt-aaaaaagtcactaacagtaaataaaattgtttaattatacgaa 586

                                                                       
Query: 152 attctgttaccatactatgtttggaagcacttggtttttgtcattattgtttacttgtga 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 attctgttaccatactatgtttggaagcacttggtttttgtcattattgtttacttgtga 526

                                                                       
Query: 212 tcaacttaaggtgacttactggttagccagaaacaccttcatgctaaattgagaaaaaat 271
           ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tcaacttaaggcgactcactggttagccagaaacaccttcatgctaaattgagaaaaaat 466

                                                                       
Query: 272 gaaaaaaagaaaaggaatcaaagggaatgaagtgacttgttaaactttagcaaaaccttt 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaaaaaaagaaaaggaatcaaagggaatgaagtgacttgttaaactttagcaaaaccttt 406

                                                                       
Query: 332 tgagtacattgaccaaaataaagcctttatctaaacaattagaaccattgcttattttgt 391
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgagtacattgaccaaaataaagcctttatctaaacaattagaaccattgcttattttgt 346

                                                                       
Query: 392 tagcaccaaaacatacaaagagattgactatgcatatgagtttaaatcctggatgtattc 451
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tagcaccaaaacatacaaagagattgactatgcatatgagtttaaatcctggatgtattc 286

                                     
Query: 452 catgaccctttacttttctactatgc 477
           ||||||||||||||||||||||||||
Sbjct: 285 catgaccctttacttttctactatgc 260


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 876
Length adjustment: 10
Effective length of query: 467
Effective length of database: 866
Effective search space:   404422
Effective search space used:   404422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)