| Query= MSMg01no439_m20.g1 MSMg01no439_m20.g1 CHROMAT_FILE:
MSMg01no439_m20.g1 PHD_FILE: MSMg01no439_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:02 2005
(167 letters)
>mm_chr12_39543354_39543920
Length = 567
Score = 308 bits (159), Expect = 2e-88
Identities = 165/167 (98%)
Strand = Plus / Plus
Query: 1 acttacacaattatttgtttcattatttactttgtttcatttaaattgaaaaataggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttacacaattatttgtttcattatttactttgtttcatttaaattgaaaaataggttg 260
Query: 61 ttttccttcacaaaaatattggctgcctcttaaactgtttttttttaatatacgtgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttccttcacaaaaatattggctgcctcttaaactgtttttttttaatatacgtgttct 320
Query: 121 ttcattctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatg 167
|||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 321 ttcattctgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtatgtatg 367
Score = 72.3 bits (37), Expect = 2e-17
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 131 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatg 167
|||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatg 523
Score = 70.3 bits (36), Expect = 6e-17
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 128 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatg 167
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 488 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatg 527
Score = 64.5 bits (33), Expect = 3e-15
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 128 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 164
|||||||| ||||||||||||||||||||||||||||
Sbjct: 478 tgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgt 514
Score = 64.5 bits (33), Expect = 3e-15
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 128 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 164
|||||| ||||||||||||||||||||||||||||||
Sbjct: 480 tgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 516
Score = 64.5 bits (33), Expect = 3e-15
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 128 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 164
|||| ||||||||||||||||||||||||||||||||
Sbjct: 482 tgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 518
Score = 62.6 bits (32), Expect = 1e-14
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 128 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatg 167
||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 492 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatg 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 7
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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