Query= MSMg01no439_p05.b1 MSMg01no439_p05.b1 CHROMAT_FILE:
MSMg01no439_p05.b1 PHD_FILE: MSMg01no439_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:12 2005
(378 letters)
>mm_chr12_110105252_110106029
Length = 778
Score = 542 bits (280), Expect = e-158
Identities = 329/346 (95%), Gaps = 2/346 (0%)
Strand = Plus / Minus
Query: 5 ggaattctccaatttgctggtgtgaccccaatcactacagagcttggtagggcccaggag 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggaattctccaatgtgctggtgtgaccccaatcactacagagcttggtagggcccaggag 287
Query: 65 agtgacgggaggacaggtgtatcagctgctctctcgtgggagtgttcgctaggccccagg 124
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 286 agtgatgggaggacaggtgtatcagctgctctctcgtgggagtgttcgctgggccccagg 227
Query: 125 ttctccagttctaagaatctttagctgggtatggtgatggactcctttaatcctagcacc 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 226 ttctccagttctaagaatctttagctgggtatggtgatagactcctttaatcctagcacc 167
Query: 185 caaagccaagtgggcagatctctgattttgaggccagcctgacctatataatgagttctg 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 166 caaagccaagtgggcagatctctgattttgaggccagcctgatctatataatgagttctg 107
Query: 245 agatagatggatggatagatac--agagagatttttttagagagagagagagagaaggat 302
|||||||||||||||||||||| | | | || | ||||||||||||||||||||||
Sbjct: 106 agatagatggatggatagatacatacatacatacatacagagagagagagagagaaggat 47
Query: 303 tttgactaactgcaggtccctcctacccctctgtactctcctccca 348
|||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 46 tttgactaactgcaggcccctcctacccctctgtactgtcctccca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_p05.g1 MSMg01no439_p05.g1 CHROMAT_FILE:
MSMg01no439_p05.g1 PHD_FILE: MSMg01no439_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:12 2005
(345 letters)
>mm_chr12_109919667_109920411
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%), Gaps = 1/345 (0%)
Strand = Plus / Plus
Query: 1 caggtcctcagagcttccacacttccccagggagcccaagcagacagctaggcaggtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtcctcagagcttccacacttccccagggagcccaagcagacagctaggcaggtgtg 260
Query: 61 gcaaggggcccttgatctggtccagctaaggggaaaacaccaacaattccattcacagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaggggcccttgatctggtccagctaaggggaaaacaccaacaattccattcacagtg 320
Query: 121 gacactcagcggtgctggggttttaaccatccagagcctccacacgttagtctagcaagc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 gacactcagcggtgctggggttttaaccatccagagcctccacacattagtctagcaagc 380
Query: 181 taccacgctactgcttagccaccccctgaccaagaagctatttaatgtcatacttggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taccacgctactgcttagccaccccctgaccaagaagctatttaatgtcatacttggttt 440
Query: 241 ctctctgtgtaatgccaactagactaatgctacagttagatcaccaatccacctttctct 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctc-ctgtgtaatgccaactagactaatgctacagttagatcaccaatccacctttctct 499
Query: 301 accagaagcacaacccctgaccctgccccagtccctacagtcagc 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 accagaagcacaacccctgaccctgccccagtccctacagtcagc 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
