Query= MSMg01no440_e01.b1 MSMg01no440_e01.b1 CHROMAT_FILE:
MSMg01no440_e01.b1 PHD_FILE: MSMg01no440_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:38 2005
(502 letters)
>mm_chr12_51649694_51650594
Length = 901
Score = 835 bits (432), Expect = 0.0
Identities = 456/464 (98%), Gaps = 1/464 (0%)
Strand = Plus / Minus
Query: 1 agtctagaaactcaacctggagaattcatattcttattacacttatggttgtttggcctt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 463 agtctagaaactcaacctggagaattcatattcttattacac-tatggttgtttggcctt 405
Query: 61 tggcaaatgtttcaacgtttgcctagggaaaacataagtaactgtggcagcatcaaatac 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 404 tggcaaatgtttcaacgtttgcctagggaaaacataagtaactgtgccagcatcaaatac 345
Query: 121 atattttcagttctaagtggttacatggccagtcttccagttaatagggacttcacattt 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atattttcagttttaagtggttacatggccagtcttccagttaatagggacttcacattt 285
Query: 181 taaaaatgacctagggttttctatgtagagttgactcccgagtaaaggagcgtttttaca 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 taaaaatgacttagggttttctatgtagagttgactcccgagtaaaggagcgtttttaca 225
Query: 241 tagaatactctgatgtttctagagactttttaagttgtctgagactttcatatatgcatg 300
|||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 224 tagattactctgaagtttctagagtctttttaagttgtctgagactttcatatatgcatg 165
Query: 301 taatgtgttttgatcaaatccaccccctgtccactcccctcatttcttccctatcttacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 taatgtgttttgatcaaatccaccccctgtccactcccctcatttcttccctatcttacc 105
Query: 361 accatgtctccttgccaacttgatgtggtcttgttttaaattccagcatgcatgcccact 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 accatgtctccttgccaacttgatgtggtcttgttttaaattccagcatgcatgcccacg 45
Query: 421 ggagaaaggccatcagctggaatgtgggcagcctgctgagggtc 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 ggagaaaggccatcagctggaatgtgggcagcctgctgagggtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 901
Length adjustment: 10
Effective length of query: 492
Effective length of database: 891
Effective search space: 438372
Effective search space used: 438372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_e01.g1 MSMg01no440_e01.g1 CHROMAT_FILE:
MSMg01no440_e01.g1 PHD_FILE: MSMg01no440_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:38 2005
(293 letters)
>mm_chr12_51450997_51451689
Length = 693
Score = 487 bits (252), Expect = e-142
Identities = 282/292 (96%)
Strand = Plus / Plus
Query: 1 ctctgaaaagcaaaatgaagtaggcagacaatgtgtctaggaggtgggcacagtgggaca 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ctctgaaaagcaaagtgaagtaggcagacaatgtgtctaggaggtgggcaaagtgggaca 260
Query: 61 tgagatggagaagtggcatgacagtacctaggcaggaaaaggaagagccatgcagaaact 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagatggagaagtggcatgacggtacctaggcaggaaaaggaagagccatgcagaaact 320
Query: 121 acaggtcacacagggctccttaaggatctggagtgccaaggtaacttagaaatctacaag 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 acaggtcacacagggctccttaaggatctggagtgccaaggtaacttcgaaatctacaag 380
Query: 181 aatagggcatatggataccctacacttctttctacaaaatcagaaaaacaattatttcaa 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagggcatatggataccctacacttctttctacaaaatcagaaaaacaattatttcaa 440
Query: 241 acatctggctttttttttatggggaatgctgtgacatagtactggcctctaa 292
|| |||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 441 acgtctggcttttgtggaatggggaatgctgtgacatagtactggcctctaa 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
