Query= MSMg01no440_k18.b1 MSMg01no440_k18.b1 CHROMAT_FILE:
MSMg01no440_k18.b1 PHD_FILE: MSMg01no440_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:12 2005
(329 letters)
>mm_chr12_27831272_27832000
Length = 729
Score = 617 bits (319), Expect = 0.0
Identities = 323/325 (99%), Gaps = 2/325 (0%)
Strand = Plus / Minus
Query: 1 tgtatgatttaaccccaatgtctgggtcttctcccctcaatggaatcaagactatgttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtatgatttaaccccaatgtctgggtcttctcccctcaatggaatcaagactatgttct 265
Query: 61 acagaaatgccatcaggccaacctgatggagactccattctcaagtgattccacattgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagaaatgccatcaggccaacctgatggagactccattctcaagtgattccacattgtg 205
Query: 121 tcaatatgatggtttaaatgagactggccctataggttcagttcatacatttgaatactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tcaatatgatggtttaaatgagactggccctataggttcagttcatacatttgaatactg 145
Query: 181 gatcccaattggtagaagaagtatgacatggggacaggtgacttgagacttccaaagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gatcccaattggtagaagaagtatgacatggggacaggtgacttgagacttccaaagact 85
Query: 241 gtcaccatccccagcatcttctctctctcccttgagtgtgtgtgtgtgtgtgtgtgtgtg 300
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 84 gtcaccatccccagcatcttctctctctcccttga--gtgtgtgtgtgtgtgtgtgtgtg 27
Query: 301 tgtgtgtgcatgtgtgtgtgtgtgt 325
|||||||||||||||||||||||||
Sbjct: 26 tgtgtgtgcatgtgtgtgtgtgtgt 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_k18.g1 MSMg01no440_k18.g1 CHROMAT_FILE:
MSMg01no440_k18.g1 PHD_FILE: MSMg01no440_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:12 2005
(575 letters)
>mm_chr12_27646677_27647651
Length = 975
Score = 1112 bits (575), Expect = 0.0
Identities = 575/575 (100%)
Strand = Plus / Plus
Query: 1 agaatcctagggacaagaactcaagcaaagtgcatgaagaccatgttacttgctggcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaatcctagggacaagaactcaagcaaagtgcatgaagaccatgttacttgctggcttt 260
Query: 61 cttcccatggctttccaatacaacctaaccaatggggggactgtcagcggagcattaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcccatggctttccaatacaacctaaccaatggggggactgtcagcggagcattaatt 320
Query: 121 atgaatcattaatcaagagaatgacccccacagacttgccaacaggccaatgtatcggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaatcattaatcaagagaatgacccccacagacttgccaacaggccaatgtatcggag 380
Query: 181 acattttctcagttgagtatcttcttcccaaaccaccctacaaaaaacttcctaggacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acattttctcagttgagtatcttcttcccaaaccaccctacaaaaaacttcctaggacag 440
Query: 241 ctatcgtactcagggtacttgctaaatttctgagtatttgttgagatttgattggtgaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctatcgtactcagggtacttgctaaatttctgagtatttgttgagatttgattggtgaca 500
Query: 301 cttgaaactggtcatagtgtttacactggataatgctacacgctagagccttcccagctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgaaactggtcatagtgtttacactggataatgctacacgctagagccttcccagctc 560
Query: 361 ttggggagccaggttactagaacatggttggtagaagtttgtataagatttatgttcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttggggagccaggttactagaacatggttggtagaagtttgtataagatttatgttcaaa 620
Query: 421 taaaagtatacagggctggagagatggctcagcagttaagagcactgacattcttacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaaagtatacagggctggagagatggctcagcagttaagagcactgacattcttacaga 680
Query: 481 ggacccaggttcagtttccagcacccacatgctgcctcacaaccatttgtaaactctgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggacccaggttcagtttccagcacccacatgctgcctcacaaccatttgtaaactctgta 740
Query: 541 actccaatttcagaaaactggatgccttatactgg 575
|||||||||||||||||||||||||||||||||||
Sbjct: 741 actccaatttcagaaaactggatgccttatactgg 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
