Query= MSMg01no443_c13.b1 MSMg01no443_c13.b1 CHROMAT_FILE:
MSMg01no443_c13.b1 PHD_FILE: MSMg01no443_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:40 2005
(185 letters)
>mm_chr12_13016080_13016665
Length = 586
Score = 337 bits (174), Expect = 3e-97
Identities = 183/188 (97%), Gaps = 5/188 (2%)
Strand = Plus / Plus
Query: 1 ggttgtacaggtttgctaacagttcattacacgtacctgtgagttcatatacacacactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggttgtacaggtttgctaacagttcattacacgtacctgtgagttcatatacacacactc 260
Query: 61 acacacaatgacatatatgtctaactgtgaaatgattctggtattaaatactgatgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacacaatgacatatatgtctaactgtgaaatgattctggtattaaatactgatgccct 320
Query: 121 ctta---catggtctaggcacaatcccagtccaggttggatgggctgcctttgcaaggtt 177
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 c--agaacatggtctaggcacaatcccagtccaggttggatgggctgcctttgcaaggtt 378
Query: 178 gatggctg 185
||||||||
Sbjct: 379 gatggctg 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 586
Length adjustment: 8
Effective length of query: 177
Effective length of database: 578
Effective search space: 102306
Effective search space used: 102306
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_c13.g1 MSMg01no443_c13.g1 CHROMAT_FILE:
MSMg01no443_c13.g1 PHD_FILE: MSMg01no443_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:40 2005
(416 letters)
>mm_chr12_13193825_13194640
Length = 816
Score = 679 bits (351), Expect = 0.0
Identities = 401/421 (95%), Gaps = 6/421 (1%)
Strand = Plus / Minus
Query: 1 atatctttgtgtgttttgtttttttcatgctagagtttctctgtataaccctggctttcc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 643 atatctttgtgtgttttgtttttttcatgctagggtttctctgtataaccctggctttcc 584
Query: 61 tgggacttgctctgtaagtcggactgctcttgaactcagagatctgcctgccttctgcct 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 583 tgggacttgctctgtaagtcggactgctcttgaactcagagatttgcctgccttctgcct 524
Query: 121 ccagaatgctgggattaaaagtgtgtgccactgcttcagaattctaatatggaaataaat 180
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 523 ccagaatgctgggattaaaagtgtgtgccaccgcttcagaattctaatatcgaaataaat 464
Query: 181 tatttctgtgatgtacatagaggagagccacgtcccacagttcatagaacgatttcattt 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 463 tatttctgtgatgtacatagaggagagccatgtcccacagttcatagaacgatttcattt 404
Query: 241 gaggttcactgattctttcttcatcgtcccctccaaaggtctccaccaat------gtaa 294
|| | ||||||||| |||||||| | ||||||||||||||||||||||| ||||
Sbjct: 403 gaagcacactgattccttcttcattggcccctccaaaggtctccaccaatgagggagtaa 344
Query: 295 agcaaggttgctgacgtgtcccaagccaaagactaggttggatattatttcattaaacat 354
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 343 agcaaggttgctgacgtgtcccaagccaaagcctaggttggatattacttcattaaacat 284
Query: 355 catcacaggaagttggaaaggtgactcggcatgtcaattgtttgctatgcaagcatgagg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 283 catcacaggaagttggaaaggtgactcggcatgtcaattgtttgctatgcaagcacgagg 224
Query: 415 a 415
|
Sbjct: 223 a 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
