Query= MSMg01no444_j14.b1 MSMg01no444_j14.b1 CHROMAT_FILE:
MSMg01no444_j14.b1 PHD_FILE: MSMg01no444_j14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:32 2005
(380 letters)
>mm_chr12_99682253_99683032
Length = 780
Score = 712 bits (368), Expect = 0.0
Identities = 377/380 (99%), Gaps = 1/380 (0%)
Strand = Plus / Plus
Query: 1 ctgtgcagttctgccaaggaagtctcgaacttcataagtaggagagagggaccagcttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtgcagttctgccaaggaagtctcgaacttcataagtaggagagagggaccagcttgg 260
Query: 61 agaggaatgtgtgtaagccactcattctaattacctacttcaggcctcaagaggccacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaggaatgtgtgtaagccactcattctaattacctacttcaggcctcaagaggccacgt 320
Query: 121 cccatgtccaattactgtgaacacaacctcttacatgtttttccatttacacaaacaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccatgtccaattactgtgaacacaacctcttacatgtttttccatttacacaaacaagg 380
Query: 181 ttattttagtaagcttgcaaatatttttgttcattgaatttttttaaatttttttttatt 240
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 381 ttattttagtaagcttgcaaatatttttgttcattgaattttttttaatttttttt-att 439
Query: 241 tttctcttcttcataataatacctgcacttcttccaatgtctatgtgatttcttagaatt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttctctccttcataataatacctgcacttcttccaatgtctatgtgatttcttagaatt 499
Query: 301 ctgacatacattatccagactgttttgtctgccttaggagtatttttagcgtgcattttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgacatacattatccagactgttttgtctgccttaggagtatttttagcgtgcattttc 559
Query: 361 agcctggacatcggagattt 380
||||||||||||||||||||
Sbjct: 560 agcctggacatcggagattt 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_j14.g1 MSMg01no444_j14.g1 CHROMAT_FILE:
MSMg01no444_j14.g1 PHD_FILE: MSMg01no444_j14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:32 2005
(558 letters)
>mm_chr12_99838708_99839665
Length = 958
Score = 737 bits (381), Expect = 0.0
Identities = 390/393 (99%)
Strand = Plus / Minus
Query: 166 agggtcagaaatcaattctctctctctgtgtctctctctgtgtctctctgtgtctctctc 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 agggtcagaaatcaattctctctctctgtgtctctctctgtgtctctctgtgtctctctc 899
Query: 226 tgtctctctgtctctgtttgtctgtctgcctgcctgcctctctgtctctctctgtctctc 285
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 898 tgtctctctgtctctgtctgtctgtctgcctacctgcctctctgtctctctctgtctctc 839
Query: 286 ttcgccatggagtttgaacccaggacatcatgcatgctgattaatcactctaccatggag 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 838 ttcgccatggagtttgaacccaggacatcatgcatgctgattaatcactctaccacggag 779
Query: 346 ctatatccaccctcagctccaaaaacaaacacatgaacaaacaaatacacagaataagac 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ctatatccaccctcagctccaaaaacaaacacatgaacaaacaaatacacagaataagac 719
Query: 406 ccaaccctccccctgccccccaaaccagagtgcctttcttgtccctactcaactaaccac 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ccaaccctccccctgccccccaaaccagagtgcctttcttgtccctactcaactaaccac 659
Query: 466 agagctcctcggagcatgagctgaaaaccttcagtgtttgattcattttgaaagtgaacc 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 agagctcctcggagcatgagctgaaaaccttcagtgtttgattcattttgaaagtgaacc 599
Query: 526 atagattcactgagaaatatcgaaaaaaaaaaa 558
|||||||||||||||||||||||||||||||||
Sbjct: 598 atagattcactgagaaatatcgaaaaaaaaaaa 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
