Query= MSMg01no445_d11.b1 MSMg01no445_d11.b1 CHROMAT_FILE:
MSMg01no445_d11.b1 PHD_FILE: MSMg01no445_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:20 2005
(319 letters)
>mm_chr12_47767141_47767859
Length = 719
Score = 553 bits (286), Expect = e-162
Identities = 310/318 (97%)
Strand = Plus / Minus
Query: 1 tcaatataataccaatagatatgccccttcaatgcacagatttcatcttgagatagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tcaatataataccaatagatatgccccttcaatgcacagatttcatcttgagatagcaga 459
Query: 61 ttgtgtgactggaaatgaatttgttctgcctactcagaaaagaaaatggctttggcttct 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttgtgtggctggaaatgaatttgttctgcctactcagaaaagaaaatggctttggcttct 399
Query: 121 gaaagtcaaacatgaaaaagtgaggctaagagatgtcaacacattacatttctgagaaat 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 398 gaaagtcaaacatgaaaaagtgaggctaagagatgtcaacacattgcatttctgagaaat 339
Query: 181 atgaaaatgtgacatacatgcattataagggcagtaaatataattaactctagccatgta 240
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 338 atgaaaatgtgacatgcatgcattataagggcagtaaatacaattaactctagccatgta 279
Query: 241 gaaaccatatcctgaagctactgcctgattattatgaggtgaccagcttacctcttaatg 300
||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 278 gaaaccataccctgaagctaccgcctgattaccatgaggtgaccagcttacctcttaatg 219
Query: 301 tgtgaattgaaagcagta 318
||||||||||||||||||
Sbjct: 218 tgtgaattgaaagcagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_d11.g1 MSMg01no445_d11.g1 CHROMAT_FILE:
MSMg01no445_d11.g1 PHD_FILE: MSMg01no445_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:20 2005
(511 letters)
>mm_chr12_47611922_47612832
Length = 911
Score = 928 bits (480), Expect = 0.0
Identities = 504/512 (98%), Gaps = 1/512 (0%)
Strand = Plus / Plus
Query: 1 ttgttgatgtttaaataatttcaataatttgactttccatttttcagtagactaatgaac 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgttgatgttttaataatttcaataatttgactttccatttttcagtagactaatgaac 260
Query: 61 tgttatttgctaagtttttatatactactgctaaaaatctacagaaaaaaatctgccata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttatttgctaagtttttatatactactgctaaaaatctacagaaaaaaatctgccata 320
Query: 121 tatgtgttatgtaaatcaccacaatgccatatagatccactgaatatcctaaatagttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtgttatgtaaatcaccacaatgccatatagatccactgaatatcctaaatagttga 380
Query: 181 agctgatgtatctcaggattcagaatatttctggctttagaaaggtaatgtgattgtaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 agctgatgtatctcaggattcagaatatttctggctttagaaaggtaatgtgaatgtaat 440
Query: 241 gtaaagataaacaagattagtaaacaatagtcttatatccaaatacattaaacaagaagt 300
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 gtaaggataaacaagattggtaaacaatagtcttatatccaaatacattaaacaaaaagc 500
Query: 301 attaacacatgttgcttgctgaattacaaggacttttttt-aatatctggagcacataat 359
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 attaacacatgttgcttgctgaattacaaggacttttttttaatatctggagcacataat 560
Query: 360 tttgtataattaagaacaaaggattgtagacatctatatcattgacattgtcataaataa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgtataattaagaacaaaggattgtagacatctatatcattgacattgtcataaataa 620
Query: 420 aataactacttgtctaaaataaaacagtatttccaattatctaacatctcattatgacat 479
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 aataactacttgtctaaaataaatcagtatttccaattatctaacatctcattatgacat 680
Query: 480 caaagaaagctttataaaagtgatactaagta 511
||||||||||||||||||||||||||||||||
Sbjct: 681 caaagaaagctttataaaagtgatactaagta 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
