Query= MSMg01no445_e18.b1 MSMg01no445_e18.b1 CHROMAT_FILE:
MSMg01no445_e18.b1 PHD_FILE: MSMg01no445_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:27 2005
(450 letters)
>mm_chr12_71238246_71239095
Length = 850
Score = 677 bits (350), Expect = 0.0
Identities = 401/424 (94%), Gaps = 14/424 (3%)
Strand = Plus / Plus
Query: 34 ttatgtttgttctcttgtgtcaccttgaccatatgctagacatcaggtatcggagagagg 93
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ttatgtttgtcctcttgtgtcgccttgaccatatgctagacatcaggtatcggagagagg 293
Query: 94 ttggtttggcttgtgattctagcagctgcaaagtctaagtagccaaacagcatagtgtca 153
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 294 ttggtttggcttgtgatcctagcagctgcaaagtctatgtagccaaacagcatagtgtca 353
Query: 154 tgaactctcgcaagggtccttctggggccgcacagtgcagtggagatgtattaaggaagg 213
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 354 tgaactctcgcaagggtccttccggggccgcacagtgcagtggagatgtagtaaggaagg 413
Query: 214 ctgctgtactctgaaggctcagtcacgcatacgggcaggagtcaggaaactagggaga-- 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ctgctgtactctgaaggctcagtcacgcatacgggcaggagtcaggaaactagggagaag 473
Query: 272 -t---tttttttcgctttccacgacagcttcctgttgcagaaaggagtccagtcctgtga 327
| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ctggct------cactttccacgacagcttcctgttgcagaaaggagtccagtcctgtga 527
Query: 328 gaactgaattaatccctgctgcag-acggaggacttgacctttctagatcaccacctcat 386
||||||||||||||||| ||| || |||||||||||||||||||||||||||||| ||||
Sbjct: 528 gaactgaattaatccctactg-aggacggaggacttgacctttctagatcaccacttcat 586
Query: 387 ggcttcgctgcctctcaatacgactacattgttgaccaagtatgtagtacacacaccttt 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ggcttcgctgcctctcaatacgactacattgttgaccaagtatgtagtacacacaccttt 646
Query: 447 ggca 450
||||
Sbjct: 647 ggca 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_e18.g1 MSMg01no445_e18.g1 CHROMAT_FILE:
MSMg01no445_e18.g1 PHD_FILE: MSMg01no445_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:27 2005
(403 letters)
>mm_chr12_71399095_71399897
Length = 803
Score = 752 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Minus
Query: 1 tgcagttaggatagtcctttggttttgggaaacccatggatgggagacagcctttatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgcagttaggatagtcctttggttttgggaaacccatggatgggagacagcctttatcac 334
Query: 61 aacagttccctccacacaagagcaatttctagagcagtctgttagcatccattgctccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aacagttccctccacacaagagcaatttctagagcagtctgttagcatccattgctccca 274
Query: 121 gcagctccaaggatgcaaacactaggagagaattctgggcagaacatctcattgttcact 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcagctccaaggatacaaacactaggagagaattctgggcagaacatctcattgttcact 214
Query: 181 acagttataaatatgcccatgatcacacaactagcaaaatgctagaattcaaatgctggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 acagttataaatatgcccatgatcacacaactagcaaaatgctagaattcaaatgctggt 154
Query: 241 ctgtctgactttaaagtgtgtctatttaacactagtactatattggtccctgatacccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ctgtctgactttaaagtgtgtctatttaacactagtactatattggtccctgatacccta 94
Query: 301 tctgtctgatttggttgttactatctgatatctgatataccttctgatacatttttatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tctgtctgatttggttgttactatctgatatctgatataccttctgatacatttttatgg 34
Query: 361 cttaaaaatgagaaaaagttggcacacttggat 393
|||||||||||||||||||||||||||||||||
Sbjct: 33 cttaaaaatgagaaaaagttggcacacttggat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
