Query= MSMg01no446_d14.b1 MSMg01no446_d14.b1 CHROMAT_FILE:
MSMg01no446_d14.b1 PHD_FILE: MSMg01no446_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:41 2005
(282 letters)
>mm_chr12_16590749_16591430
Length = 682
Score = 545 bits (282), Expect = e-160
Identities = 282/282 (100%)
Strand = Plus / Minus
Query: 1 acctctccccttttctgcctcctcaagtgctttcagaaaggctgaaacacctcagccata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acctctccccttttctgcctcctcaagtgctttcagaaaggctgaaacacctcagccata 423
Query: 61 atgggattacggcccagcccgtgggaggccctcggcctggggaggtttagtctggctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgggattacggcccagcccgtgggaggccctcggcctggggaggtttagtctggctgct 363
Query: 121 tatctacaggctaaaggaattacccacttcctcgagagcttttcagtgccagcgcagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatctacaggctaaaggaattacccacttcctcgagagcttttcagtgccagcgcagctg 303
Query: 181 gaggaagtgaaatttgggactttaagtctagtggtttgattgtatagaacatttaaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gaggaagtgaaatttgggactttaagtctagtggtttgattgtatagaacatttaaagag 243
Query: 241 aaagttgcacggggcgtatttagaagagagcctagtgtgggc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaagttgcacggggcgtatttagaagagagcctagtgtgggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_d14.g1 MSMg01no446_d14.g1 CHROMAT_FILE:
MSMg01no446_d14.g1 PHD_FILE: MSMg01no446_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:41 2005
(196 letters)
>mm_chr12_16534215_16534810
Length = 596
Score = 344 bits (178), Expect = 2e-99
Identities = 190/198 (95%), Gaps = 8/198 (4%)
Strand = Plus / Plus
Query: 1 agtctctgctgatgcggactgttgcccatgatggactgttggtcatctccagccatctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctctgctgatgcggactgttgcccatgatggactgttggtcatctccagccatctca 260
Query: 61 ttactggctatccatggctcctgaaggctgtggtcctgcccacaaccctcccatctccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttactggctatccatggctcctgaaggctgtggtcctgcccacaaccctcccatctccct 320
Query: 121 ttatgtctttt----aagttatcccagatgagacacagaatgaggtgactatcaaagatt 176
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatgtc----cccaaagttatcccagatgagacacagaatgaggtgactatcaaagatt 376
Query: 177 tgaggatgtcataagaga 194
||||||||||||||||||
Sbjct: 377 tgaggatgtcataagaga 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
