Query= MSMg01no446_e03.b1 MSMg01no446_e03.b1 CHROMAT_FILE:
MSMg01no446_e03.b1 PHD_FILE: MSMg01no446_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:44 2005
(182 letters)
>mm_chr12_26671287_26671868
Length = 582
Score = 319 bits (165), Expect = 6e-92
Identities = 175/181 (96%), Gaps = 6/181 (3%)
Strand = Plus / Minus
Query: 5 gaattccattagtacca---cttgtgtagcttgaactccagagcctctgtttctctcatc 61
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaattccattag---caagccttgtgtagcttgaactccagagcctctgtttctctcatc 326
Query: 62 tgtgcaactatcctgatggataacacaatttctatacgctcctgctgagaaggagagcaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtgcaactatcctgatggataacacaatttctatacgctcctgctgagaaggagagcaa 266
Query: 122 ttaagtataaaagacatccaggcactctgtagtatggacctataaccccagcacaggcag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaagtataaaagacatccaggcactctgtagtatggacctataaccccagcacaggcag 206
Query: 182 g 182
|
Sbjct: 205 g 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 582
Length adjustment: 8
Effective length of query: 174
Effective length of database: 574
Effective search space: 99876
Effective search space used: 99876
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_e03.g1 MSMg01no446_e03.g1 CHROMAT_FILE:
MSMg01no446_e03.g1 PHD_FILE: MSMg01no446_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:44 2005
(350 letters)
>mm_chr12_26482515_26483264
Length = 750
Score = 669 bits (346), Expect = 0.0
Identities = 349/350 (99%)
Strand = Plus / Plus
Query: 1 ttcatattttttcctttgggtgctataaatgctttataataagagcaaaagataaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatattttttcctttgggtgctataaatgctttataataagagcaaaagataaacaaa 260
Query: 61 taatatgagccaacaaaattgtaacagaaatcttatttgcaaataaaaatgttggctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatatgagccaacaaaattgtaacagaaatcttatttgcaaataaaaatgttggctgca 320
Query: 121 tacaaaattcaaaacaacctagaaacatactgtataaaattaatcacaattaatgcaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaaaattcaaaacaacctagaaacatactgtataaaattaatcacaattaatgcaatg 380
Query: 181 ttgttgggtacatgagtttgcttaaagcatgttttaatgatgattaaaagagctagtaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgttgggtacatgagtttgcttaaagcatgttttaatgatgattaaaagagctagtaat 440
Query: 241 atgaaatattcactgatcatggcagtgacagaactagaaaatgtaaaggaataaatctaa 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaatagtcactgatcatggcagtgacagaactagaaaatgtaaaggaataaatctaa 500
Query: 301 tgagaggagtttacaataacttttatataaaaatcattagaggttcagtt 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagaggagtttacaataacttttatataaaaatcattagaggttcagtt 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
