Query= MSMg01no448_m23.b1 MSMg01no448_m23.b1 CHROMAT_FILE:
MSMg01no448_m23.b1 PHD_FILE: MSMg01no448_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:12 2005
(365 letters)
>mm_chr12_110700548_110701315
Length = 768
Score = 688 bits (356), Expect = 0.0
Identities = 364/368 (98%), Gaps = 3/368 (0%)
Strand = Plus / Plus
Query: 1 cctatttctccacgccac---tttttttttttgatctccgtgttgtggagagcagccgtg 57
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 cctatttctccacgccacttttttttttttttgatctccctgttgtggagagcagccgtg 260
Query: 58 tctctgtgtctctcctgataaagggggcccggctgttctcttagcaactcctcctccatc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctgtgtctctcctgataaagggggcccggctgttctcttagcaactcctcctccatc 320
Query: 118 caaaagatccatcatccaccatccatccagccagggagtgtttccaagcacctgcagagt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaagatccatcatccaccatccatccagccagggagtgtttccaagcacctgcagagt 380
Query: 178 gtaaggcagtgagtgttcttggagctgtgggatgtgcaggccgaggggcatagtctggga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaggcagtgagtgttcttggagctgtgggatgtgcaggccgaggggcatagtctggga 440
Query: 238 ggggagtagacatgcatgtgcccccaggaagccaagcacagggcaggcaaaaacccaaaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggagtagacatgcatgtgcccccaggaagccaagcacagggcaggcaaaaacccaaaa 500
Query: 298 ctccgtggaagccggatggtccagagcaggtgcctccctcagagtgccaccacctcacct 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctccgtggaagccggatggtccagagcaggtgcctccctcagagtgccaccacctcacct 560
Query: 358 tccaacgt 365
||||||||
Sbjct: 561 tccaacgt 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 768
Length adjustment: 9
Effective length of query: 356
Effective length of database: 759
Effective search space: 270204
Effective search space used: 270204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_m23.g1 MSMg01no448_m23.g1 CHROMAT_FILE:
MSMg01no448_m23.g1 PHD_FILE: MSMg01no448_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:12 2005
(175 letters)
>mm_chr12_110836265_110836835
Length = 571
Score = 313 bits (162), Expect = 3e-90
Identities = 170/175 (97%), Gaps = 4/175 (2%)
Strand = Plus / Minus
Query: 1 agcagagaagggagtggacactgtaatatatttaggagatttgacccatgtgcaaactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agcagagaagggagtggacactgtaatatatttaggagatttgacccatgtgcaaactga 312
Query: 61 aggcactattgcatcctgagtgaggggtgagatatcatttctgatccttttgcatggggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aggcactattgcatcctgagtgaggggtgagatatcatttctgatccttttgcatggggg 252
Query: 121 cggggggggggtgctgcggnatgcttggagtttggccaaggaaggattttaagga 175
| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 251 c----ggggggtgctgcgggatgcttggagtttggccaaggaaggattttaagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 571
Length adjustment: 8
Effective length of query: 167
Effective length of database: 563
Effective search space: 94021
Effective search space used: 94021
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
