Query= MSMg01no448_o02.b1 MSMg01no448_o02.b1 CHROMAT_FILE:
MSMg01no448_o02.b1 PHD_FILE: MSMg01no448_o02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:18 2005
(278 letters)
>mm_chr12_87119750_87120427
Length = 678
Score = 518 bits (268), Expect = e-151
Identities = 274/276 (99%)
Strand = Plus / Plus
Query: 3 ggaattccatggaaagtttcccacattttactatgattagtatccggtatgtgccacact 62
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccatggaaagtttcatacattttactatgattagtatccggtatgtgccacact 262
Query: 63 tgagacctgccctctcagggaccttagtttggctagagaagcacatttgaagtaattata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgagacctgccctctcagggaccttagtttggctagagaagcacatttgaagtaattata 322
Query: 123 caaatataaagtgactcccacaaggatctgaccctgctataagagactacttccttgaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caaatataaagtgactcccacaaggatctgaccctgctataagagactacttccttgaga 382
Query: 183 acttgagatgttaacacagacctagagaatgtttgcattgaaacactctagtctggacag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acttgagatgttaacacagacctagagaatgtttgcattgaaacactctagtctggacag 442
Query: 243 agaagctgatgctcaaagtcctgaaagacagaaacg 278
||||||||||||||||||||||||||||||||||||
Sbjct: 443 agaagctgatgctcaaagtcctgaaagacagaaacg 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_o02.g1 MSMg01no448_o02.g1 CHROMAT_FILE:
MSMg01no448_o02.g1 PHD_FILE: MSMg01no448_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:18 2005
(322 letters)
>mm_chr12_87155385_87156108
Length = 724
Score = 600 bits (310), Expect = e-176
Identities = 320/324 (98%), Gaps = 2/324 (0%)
Strand = Plus / Minus
Query: 1 cataagaaagttaggtgtttgaatcaagaggtagagctaggtagatgataattaaataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cataagaaagttaggtgtttgaatcaagaggtagagctaggtagatgataattaaataga 465
Query: 61 tcagaaagatcttcctgagctt--tgggggggggggtcctcagctgagacttaaatgccc 118
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 464 tcagaaagatcttcctgagcttggggggggggggggtcctcagctgagacttaaatgccc 405
Query: 119 agaaggtgggtgtcttgagattcaatgtccagaaggttgtttgaagcattaaatgtcatt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 404 agaaggtgggtgtcttgagattcaatgtccagaaggttgtttgaagcattaaatgccatt 345
Query: 179 gaggcattttgagcaaaaagagcagcagctgttgaaggactgagcaccgtgaagctacaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaggcattttgagcaaaaagagcagcagctgttgaaggactgagcaccgtgaagctacaa 285
Query: 239 gagggagaaggctgtacctgtgaaaggctggaggtcagaggaggaagtagctcacaaagg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gagggagaaggctgtacctgtgaaaggctggaggtcagaggaggaagtagctcacaaagg 225
Query: 299 taaggagatggctgatgtcttagt 322
||||||||||||||||||||||||
Sbjct: 224 taaggagatggctgatgtcttagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 724
Length adjustment: 9
Effective length of query: 313
Effective length of database: 715
Effective search space: 223795
Effective search space used: 223795
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
