Query= MSMg01no449_g01.b1 MSMg01no449_g01.b1 CHROMAT_FILE:
MSMg01no449_g01.b1 PHD_FILE: MSMg01no449_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:59 2005
(249 letters)
>mm_chr12_95725753_95726404
Length = 652
Score = 356 bits (184), Expect = e-103
Identities = 221/234 (94%), Gaps = 3/234 (1%)
Strand = Plus / Minus
Query: 1 atgttatgtccatacctgaacctgcaacaaagaccttaagagggctccctttttcctagg 60
|||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |
Sbjct: 434 atgttatgtccatacctgaacctgtaacaaagaccttaagaaggctcccttttgcctatg 375
Query: 61 tcaa-ccgtttacagaacaggaaggattgctacaggaagccaaactttcttcctgataga 119
|||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcaacccttttacggaacaggaaggattgctacaggaagccaaactttcttcctgataga 315
Query: 120 tatgcttattcaccaccttaaagccttttgcaggtagttgataattgtagctttttt--c 177
||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||||| |
Sbjct: 314 tatgcttattcaccaacttaaagccctttgcaagtagttaataattgtagcttttttttc 255
Query: 178 atagtacagaggatgcttgatagtatttttttctatataacaactctacttttt 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atagtacagaggatgcttgatagtatttttttctatataacaactctacttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 652
Length adjustment: 9
Effective length of query: 240
Effective length of database: 643
Effective search space: 154320
Effective search space used: 154320
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no449_g01.g1 MSMg01no449_g01.g1 CHROMAT_FILE:
MSMg01no449_g01.g1 PHD_FILE: MSMg01no449_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:59 2005
(144 letters)
>mm_chr12_95561232_95561775
Length = 544
Score = 255 bits (132), Expect = 7e-73
Identities = 141/144 (97%)
Strand = Plus / Plus
Query: 1 catccctcctctttgaaaagagtctctagctgtgcatcaattacctagtgtagtgggtaa 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catccctcctctttgaaaggagtctctagctgtgcatcaattacctagtgtagtgggtaa 260
Query: 61 ggaagagagggaggaagtgagagggtggctcataggaagacagagctgacgaatccaaag 120
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 261 ggaagagagggaggaagtgagagggtggctcctaggaagacagagctgaggaatccaaag 320
Query: 121 aaaacattctatgctctaagaaga 144
||||||||||||||||||||||||
Sbjct: 321 aaaacattctatgctctaagaaga 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
