Query= MSMg01no450_k24.b1 MSMg01no450_k24.b1 CHROMAT_FILE:
MSMg01no450_k24.b1 PHD_FILE: MSMg01no450_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:42 2005
(584 letters)
>mm_chr12_34973196_34974179
Length = 984
Score = 1110 bits (574), Expect = 0.0
Identities = 577/578 (99%)
Strand = Plus / Minus
Query: 7 gaattctcatcttatttacgattaacttctctaaagtgtagccttagatttctagaactc 66
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gaattctcatcttacttacgattaacttctctaaagtgtagccttagatttctagaactc 725
Query: 67 tgaactgggttgaatagtgctaagtaatagtgtcaaaaacagagaacttcagtgttatgg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tgaactgggttgaatagtgctaagtaatagtgtcaaaaacagagaacttcagtgttatgg 665
Query: 127 taaggaagattcctgatgtatttgcttgtttgtctgggacataaagaaggtcttgagagc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 taaggaagattcctgatgtatttgcttgtttgtctgggacataaagaaggtcttgagagc 605
Query: 187 cctctgcttcccatcacttcttactctgaggcccctgccattcctccctaactgtgacat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cctctgcttcccatcacttcttactctgaggcccctgccattcctccctaactgtgacat 545
Query: 247 gatcatttattttcatgacaagcatagctctgcctcctgcacagtaaaacgtgtgtgtca 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gatcatttattttcatgacaagcatagctctgcctcctgcacagtaaaacgtgtgtgtca 485
Query: 307 ctatgcagccatttctccagactgccctctcagtgaaccacatatcaacactgaatggcc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctatgcagccatttctccagactgccctctcagtgaaccacatatcaacactgaatggcc 425
Query: 367 tgcccacagcctcatcgtcttacacccaggaggctgaggacagaattgtcctggtcccca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgcccacagcctcatcgtcttacacccaggaggctgaggacagaattgtcctggtcccca 365
Query: 427 ccgagatgctcttccaagatacctggtgcttctttctgcctctgcaacatgggcggaagg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ccgagatgctcttccaagatacctggtgcttctttctgcctctgcaacatgggcggaagg 305
Query: 487 actctatgaatctcaccaaaattctgtgcttcattgctcatttactgcttccttatagtt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 actctatgaatctcaccaaaattctgtgcttcattgctcatttactgcttccttatagtt 245
Query: 547 acatgtattctaagtgtggcattagtgttgtcttgtag 584
||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acatgtattctaagtgtggcattagtgttgtcttgtag 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_k24.g1 MSMg01no450_k24.g1 CHROMAT_FILE:
MSMg01no450_k24.g1 PHD_FILE: MSMg01no450_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:42 2005
(572 letters)
>mm_chr12_34955143_34956114
Length = 972
Score = 1062 bits (549), Expect = 0.0
Identities = 567/573 (98%), Gaps = 2/573 (0%)
Strand = Plus / Plus
Query: 1 tctcaggtagcgtgactcttttaaaacagttatctactgtgagtcaaatatatctgcaca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcaggtagagtgactcttttaaaacagttatctactgtgagtcaaatatatctgcaca 260
Query: 61 gagcattttggtttggtgacgtagaaagtaaatctatatttttaggttgttagagtaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcattttggtttggtgacgtagaaagtaaatctatatttttaggttgttagagtaatt 320
Query: 121 ctacttgattaaatatttaaatactctttttaaacttttgaatagcttattctgtcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacttgattaaatatttaaatactctttttaaacttttgaatagcttattctgtcttaa 380
Query: 181 gctctatatgttgagtgaactggcagctacaaatcaaattcattcattctttttttt-cc 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 381 gctctatatgttgagtgaactggcagctacaaatcaaattcattctttctttttttttcc 440
Query: 240 ttcctttttagttaaaattattactttgtttcatttaatggatatttgagaagcttaata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcctttttagttaaaattattactttgtttcatttaatggatatttgagaagcttaata 500
Query: 300 tttttctattctgaactcttcactcttagggttagattcagaaacactaatagttttgtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttttctattctgaactcttcactcttagggttagattcagaaacactaatagttttgtt 560
Query: 360 tctggccatgaagacagaggggggggggaagtagaaaggtcacagaaaggaaaatctaat 419
|||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 tctggccatggagacagaaggggggggga-gtagaaaggtcacagaaaggaaaatctaat 619
Query: 420 ttattggcagttccagtggaggataataaagtcaaatgtgtcatcctataaatagctttg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttattggcagttccagtggaggataataaagtcaaatgtgtcatcctataaatagctttg 679
Query: 480 ggcagcatctcacaagtcagtggtaatgctggtgtgcctcctcagggctacactttaccc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggcagcatctcacaagtcagtggtaatgctggtgtgcctcctcagggctacactttaccc 739
Query: 540 attttaacactgcacggtgcatgactaattgct 572
|||||||||||||||||||||||||||||||||
Sbjct: 740 attttaacactgcacggtgcatgactaattgct 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
