Query= MSMg01no450_p18.b1 MSMg01no450_p18.b1 CHROMAT_FILE:
MSMg01no450_p18.b1 PHD_FILE: MSMg01no450_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:05 2005
(566 letters)
>mm_chr12_41351382_41352346
Length = 965
Score = 1046 bits (541), Expect = 0.0
Identities = 556/561 (99%), Gaps = 1/561 (0%)
Strand = Plus / Minus
Query: 1 ggctttgaactttgcaatcctttcccctcagcatcccaagtgagaggattacaaacatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggctttgaactttgcaatcctttcccctcagcatcccaagtgagaggattacaaacatgt 501
Query: 61 aacatcggaccaggctgcatgttatgttccaatgagtaattttagcttacaagagagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacatcggaccaggctgcatgttatgttccaatgagtaattttagcttacaagagagctc 441
Query: 121 tgtgagaaaacatgcgtgccattggttcaattcctggtatttaaaaaaaaaaacttggga 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 tgtgagaaaacatgcgtgccattggttcaattcctggtattt-aaaaaaaaaacttggga 382
Query: 181 ctggaatgacagctcagtgtttaaaggtacatatactcaagacctgactcaattctatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggaatgacagctcagtgtttaaaggtacatatactcaagacctgactcaattctatat 322
Query: 241 attctacattattttataggaagagaacgctttttagcttttttcataaaatttatattt 300
|||||||| || | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attctacaataataaataggaagagaacgctttttagcttttttcataaaatttatattt 262
Query: 301 atttcaatataacaaaattaacaaataaagcaacatcagtatagaaaagttaatatcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttcaatataacaaaattaacaaataaagcaacatcagtatagaaaagttaatatcaag 202
Query: 361 atttatgatatgagatggaattgaaagggaaatcataataaatttttcagaaatgtgtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttatgatatgagatggaattgaaagggaaatcataataaatttttcagaaatgtgtgc 142
Query: 421 tagatgaataattaaatatcaaaactatatttgcatgtgccctgcagatgtccaaatata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tagatgaataattaaatatcaaaactatatttgcatgtgccctgcagatgtccaaatata 82
Query: 481 aaaaagctttaaatgaagactaaagtatcaagaaattaaatttatatgctcatttgtccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 aaaaagctttaaatgaagactaaagtatcaagaaattaaatttatatgctcatttgtccc 22
Query: 541 ttaggcttttcttgagactga 561
|||||||||||||||||||||
Sbjct: 21 ttaggcttttcttgagactga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 965
Length adjustment: 10
Effective length of query: 556
Effective length of database: 955
Effective search space: 530980
Effective search space used: 530980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_p18.g1 MSMg01no450_p18.g1 CHROMAT_FILE:
MSMg01no450_p18.g1 PHD_FILE: MSMg01no450_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:05 2005
(406 letters)
>mm_chr12_41187994_41188798
Length = 805
Score = 743 bits (384), Expect = 0.0
Identities = 402/410 (98%), Gaps = 5/410 (1%)
Strand = Plus / Plus
Query: 1 tcactctatgaatgaccaaaacaaaatgcagaaatacctggcatgcaaaaacaaacaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcactctatgaatgaccaaaacaaaatgcagaaatacctggcatgcaaaaacaaacaaac 256
Query: 61 aaacaaa----taacaaacaaattaacacaagagcacacctaacttcactgattgatcag 116
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaacaaacaaataacaaacaaattaacacaagagcacacctaacttcactgattgatcag 316
Query: 117 ctcacgttttgccaagtcagtgtaaaagtgtgaatttcctaggagcaaatgttttgtgaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctcacgttttgccaagtcagtgtaaaagtgtgaatttcctaggagcaaatgttttgtgaa 376
Query: 177 ttttctgttttaggattctataaagggtttatccaaacaagaagtttcttggcaaagtca 236
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 377 ttttctgttttaggattctataaagggtttatccaaacaagaagtttcttagcaaagtca 436
Query: 237 gagtttgaaagcctctgactttgtcagaatactttgaagcaatattggaatattacagat 296
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagtttgaaagccactgactttgtcagaatactttgaagcaatattggaatattacagat 496
Query: 297 aaaaattctaaattctgtctaggaagctcttaaagaaccatgtttctcctgatgaaccga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaaaattctaaattctgtctaggaagctcttaaagaaccatgtttctcctgatgaaccga 556
Query: 357 cctcaggagatggtagagaaatattttgngtttggggggaggggtgcatt 406
||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 557 cctcaggagctggtagagaaatattttg-gtttggggggaggggtgcatt 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 805
Length adjustment: 9
Effective length of query: 397
Effective length of database: 796
Effective search space: 316012
Effective search space used: 316012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
