Query= MSMg01no451_c08.b1 MSMg01no451_c08.b1 CHROMAT_FILE:
MSMg01no451_c08.b1 PHD_FILE: MSMg01no451_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:17 2005
(342 letters)
>mm_chr12_28827598_28828339
Length = 742
Score = 630 bits (326), Expect = 0.0
Identities = 338/342 (98%)
Strand = Plus / Minus
Query: 1 agatctcatgaagaactataaacactagcatggatttgtgtgcaatatcaccaagtgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 agatctcatgaagaactataaacactagcatggatttgtgtgcaatatcaccaagtgccc 665
Query: 61 aattagagatatcacattaaacatggaaatgttgggacagtcatttctcttcttccacca 120
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aattagagatatcacagcaaacatggaaatgttgggacagtcatttctcttcttccacca 605
Query: 121 ttatgttgcattgaacccaagtctccaggcttgagtggcaagcacttttaaccactgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttatgttgcattgaacccaagtctccaggcttgagtggcaagcacttttaaccactgaga 545
Query: 181 cactttttatgccttaagaggagagttttaaaacaatgaccaactgccatttgtcaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cactttttatgccttaagaggagagttttaaaacaatgaccaactgccatttgtcaaaag 485
Query: 241 gtatatgaggggttagtgaggacaccagggaagccaaccaaattatttaaataatttcaa 300
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggagatgaggggttagtgaggacaccagggaagccaaccaaattatttaaataatttcaa 425
Query: 301 tgctctaatgaatttggattaacataaggaatggtggattgt 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgctctaatgaatttggattaacataaggaatggtggattgt 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_c08.g1 MSMg01no451_c08.g1 CHROMAT_FILE:
MSMg01no451_c08.g1 PHD_FILE: MSMg01no451_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:17 2005
(606 letters)
>mm_chr12_28691687_28692693
Length = 1007
Score = 1166 bits (603), Expect = 0.0
Identities = 606/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 1 actgttctcagaaga-tacacatagagtttatatagtataaagaagtctaagagcctcaa 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgttctcagaagaatacacatagagtttatatagtataaagaagtctaagagcctcaa 260
Query: 60 ctgaggcagcagccacctggtgtcatgaagttgatgatatgatgtgttcctatacatgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaggcagcagccacctggtgtcatgaagttgatgatatgatgtgttcctatacatgtg 320
Query: 120 gttaattttaatgtatgggaaggctggttccttagtcttagacattttctcaaagaggat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaattttaatgtatgggaaggctggttccttagtcttagacattttctcaaagaggat 380
Query: 180 ttatgtttgggagtcctactgacagggggtctccagtctagtaatgtgagagccactgag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatgtttgggagtcctactgacagggggtctccagtctagtaatgtgagagccactgag 440
Query: 240 atgaaagggatagaaagaatgggtggtgacctgtaattaggtcaggaattactttgggag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaagggatagaaagaatgggtggtgacctgtaattaggtcaggaattactttgggag 500
Query: 300 taatgatttggttactgcagtgtgaggtcaggtataccctagcactagacaggactgaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatgatttggttactgcagtgtgaggtcaggtataccctagcactagacaggactgaag 560
Query: 360 gatcatttctatggaagaaaagggctgatatattgagggtgtgcatgaccactccgtgcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatcatttctatggaagaaaagggctgatatattgagggtgtgcatgaccactccgtgcc 620
Query: 420 tgagcagtgtactaggcatgcccctacagctcatctgcaagactcccaatacaggtattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagcagtgtactaggcatgcccctacagctcatctgcaagactcccaatacaggtattt 680
Query: 480 agtggaaacagctaagccgagtaagcattatttatatggaaacactagccaatctaagaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtggaaacagctaagccgagtaagcattatttatatggaaacactagccaatctaagaa 740
Query: 540 taaggaacaatgtagtggaatgaatgaaggagactctgctattcatcctttgatataact 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaggaacaatgtagtggaatgaatgaaggagactctgctattcatcctttgatataact 800
Query: 600 gccttca 606
|||||||
Sbjct: 801 gccttca 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space: 594212
Effective search space used: 594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
