Query= MSMg01no451_e22.b1 MSMg01no451_e22.b1 CHROMAT_FILE:
MSMg01no451_e22.b1 PHD_FILE: MSMg01no451_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:30 2005
(560 letters)
>mm_chr12_11809473_11810432
Length = 960
Score = 1006 bits (520), Expect = 0.0
Identities = 547/556 (98%)
Strand = Plus / Minus
Query: 5 gaattctcccagataccaagaaccccaaaacttgcacagtttcaaatatgctcagagagg 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 760 gaattctcccagataccaagaaccccaaaacttgcacagtttctaatatgctcagagagg 701
Query: 65 cagatgcacagatggggtgtctggctgccatgtgttgttttgtacaagaaagaagataat 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 700 cagatgcacagatggggtgtctggctgccatgtgttgttttgaacaagaaagaagataat 641
Query: 125 gggaaaagagattcaaaaatgggtaagattgagtgaaagaggaaaaggaatggcaaacca 184
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 640 gggaaaagagattcgaaaatgggtaagattgagtgaaagaggaaaatgaatggcaaacca 581
Query: 185 aagcaatgggtatttgaaggaggctcacaagaaaaccattcaatcaccataaatttgtgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aagcaatgggtatttgaaggaggctcacaagaaaaccattcaatcaccataaatttgtgg 521
Query: 245 ctatttttataaattcatctcactgtagttttctatacattcccttcttccgttagataa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ctatttttataaattcatctcactgtagttttctatacattcccttcttccgttagataa 461
Query: 305 taaagcaatagagattcagaaatacttttttctataaatttatgccctttcaatttataa 364
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 taaggcaatagagattcagaaatacttttttctataaatttatgccctttcaatttataa 401
Query: 365 aagtaatctgggtataaagtatggtggaattggcaaatgctagtatttcattctcagtta 424
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 400 aagtaatctgggtataaagtatggtgggattggcaaatgctagtatttccttctcagtta 341
Query: 425 caaaccatatacaaagcacatactcataaaaccttcacttctagtagtcacaccactgta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caaaccatatacaaagcacatactcataaaaccttcacttctagtagtcacaccactgta 281
Query: 485 tttcccaggcaaacaaacattcagaggaattaaactgacaggtgatgattgcctagtgat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tttcccaggcaaacaaacattcagaggaattaaactgacaggtgatgattgcctagtgat 221
Query: 545 gacaattgtgtgtaag 560
||| ||||| ||||||
Sbjct: 220 gacgattgtctgtaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_e22.g1 MSMg01no451_e22.g1 CHROMAT_FILE:
MSMg01no451_e22.g1 PHD_FILE: MSMg01no451_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:30 2005
(567 letters)
>mm_chr12_11787829_11788794
Length = 966
Score = 980 bits (507), Expect = 0.0
Identities = 552/569 (97%), Gaps = 5/569 (0%)
Strand = Plus / Plus
Query: 1 actaaatatagagaatgtgtcaatatt--cttccgtggcctgcactaacataagagttaa 58
||||||| |||||||||| |||| | |||| ||||||||||||||| ||||||||||
Sbjct: 201 actaaatgtagagaatgtctcaa---tgccttctgtggcctgcactaacctaagagttaa 257
Query: 59 gaggtgaagagtcttgttaccaataaccagaacttcagatacccgtttctttcaaatggg 118
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 258 gaggtgaagagtcttgttaccaataaccagaacttcagatacctgtttctttcaaatggg 317
Query: 119 aggaaatttagtaatatttgtagagaaagtaagcaacatttgttaatatattcattgctt 178
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 318 aggaaatttagtaatatttgtagagaaagtaagcaatatttgttaatatattcattgctt 377
Query: 179 tcgcgtaaggtcaattgttccatgtgctgtgctctcctggggtcaggatgacggtgtctg 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcacgtaaggtcaattgttccatgtgctgtgctctcctggggtcaggatgacggtgtctg 437
Query: 239 agatctgaggacaatgtgctcttctgtggtcttagaaacaggaacacggctttgcggaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agatctgaggacaatgtgctcttctgtggtcttagaaacaggaacacggctttgcggaaa 497
Query: 299 atcctatcagactttgaatctgccctttcatcttaaggtaagccagacgtttcagtcttt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atcctatcagactttgaatctgccctttcatcttaaggtaagccagacgtttcagtcttt 557
Query: 359 aaagaagaatgagaatgtggcttgtttattgcgagaacacaggtaatctgaaaaggaaac 418
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 558 aaagaagaatgagaatgtggcttgtttattgcgagaacataggtaatctgaaaaggaaac 617
Query: 419 agtttctaaattaaagatggtatctcatatattggagaaaacaagaatgtgaatgctgcc 478
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 agtttttaaattaaagatggtatctcatatattggagaaaacaagaatgtgaatgctgcc 677
Query: 479 ttgtgtggcaggcaggggaggtagtgactctggaatgggggtggggcttattcatcttgt 538
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 678 ttgtgtggcaggcaggggaggtagtgactctggaatgggggtggcgcttattcatcttgt 737
Query: 539 gaaccgccatggtctgcttcatcttttag 567
|||| |||||||||||||||||||||||
Sbjct: 738 gaactaccatggtctgcttcatcttttag 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 966
Length adjustment: 10
Effective length of query: 557
Effective length of database: 956
Effective search space: 532492
Effective search space used: 532492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
