NTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGCACTTACTCCATCTGGCCCTGGGCTGTTTTTGGTTGGGAGGT
TTTTAATGACTTCTTCTATTTCCTTTTGTGATGTGGGTATGTTTAGAAAG
TTTACCTGCTCTTGACTTAACTTTGATATGTGGCATCTGTCTAGAAAACC
ATCCATTTCATCTAGATTTTCCAGTTTTGTTGAGTTAGGCTTTTATAGTA
GGATCTCATGATTTTTTGAATTTCCTCCATTTCTGTTGTTATGTCTCCTT
TTTTTTTTAATTAGGTATTTTCCTCGTTTGTATTTCCAATGCTATCCCAA
AAGTCCCCCATACCCACCCCCCAATCCCCTACCTACCCACTCCCCCTTTT
TGGCCCTGGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAAA
GGGCCTCTCTTTCCAGTGATGTCCAACTAGGATGTCTCCCTTTTTATTTC
TGACTTTGTTAATTTGGATACTGCCTCTCTACCCTTTAGTTAGTTTTTCT
AGGGGTTTATCTATCTTGTTGATTCTCTCAAAGAACCAGCTTTTGGTTTT
GCCGACTCTTTGNATTGTTTTCTTTGTTTCTATTTGGTTGATTTTGGCCC
TGTGTTTGACTATTTCCTGCCTTCTACTCCTCTTGGGTGAGTTTGCTTCT
TTTTGTGCTAGAGCTCTCANGTGTGCTGTTAAGTTGTTAATGTAAGATCT
CCCCAGTTTCTTTA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGAGATTTAAAAATTCAATGACT
TATATTTTTGCACTTTTTCTGCTGATAGCTTAAGTCTCCACAGCTGCTTC
TCACATCTTCACCATATATCTCCCATGCTCCTACAGTGGTAGCTGTGACT
AAGAGAAGGGGATTAATGCCTGTAATCTCAAGCAGCTGAATTCCACAAAT
GCTTTAGCTCTCTGGATCCTTCTTGTATCCGTGGATGTGTTGCATAGATG
TACGTTTCCTCCATTCCAATGTTTGTCTTCTTTCATTACATCTGCTCCCC
AATGAAGTTTATTTCAAATAAATTCTTAGAAGTACAGAATCCCAAGCAGT
GTAGTCTGTGTTCTGATCTCTGGCGCTATTTATATACACAGCACTGGTCC
ATTAAAAATAATTATATTCTCTTTGTTATAATGTATCTTGTTAGCTTGCT
ATTCTTGACTCTCTAAGAAGTCTTATTTTGTTGAAGCTATGCGGTTACTT
TATATGGCAAGAGTGTTTTAAGCCTCTCTGTATTCTCACCCTTCCCAGAA
GAGCCCTTAAGATGTGATTGTTATGTAAATTGACTCTTGCTTAGAATGTG
CACTGGATAAAGGCACAGACTCTTCCTTACTACAGTGGCACAGAGAGATG
CTAAACATGGTGACAGAAAATTCACCATCAGCCTCTTGCTCTGAATAAAG
TGGATAGGAAGTGCTGTTGG

Query= MSMg01no451_j16.g1 MSMg01no451_j16.g1 CHROMAT_FILE:
MSMg01no451_j16.g1 PHD_FILE: MSMg01no451_j16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:55 2005
         (646 letters)



>mm_chr12_40393718_40394763
          Length = 1046

 Score = 1156 bits (598), Expect = 0.0
 Identities = 634/646 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgagatttaaaaattcaatgacttatatttttgcactttttctgctgatagcttaagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgagatttaaaaattcaatgacttatatttttgcactttttctgctgatagcttaagt 260

                                                                       
Query: 61  ctccacagctgcttctcacatcttcaccatatatctcccatgctcctacagtggtagctg 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 261 ctccacagctgcttctcacatcttcagcatatatctcccatgctcctacagtggtggctg 320

                                                                       
Query: 121 tgactaagagaaggggattaatgcctgtaatctcaagcagctgaattccacaaatgcttt 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 321 tgactaagagaaggggattaatgcctgtaatctcaagcaactgaattccgcaaatgcttt 380

                                                                       
Query: 181 agctctctggatccttcttgtatccgtggatgtgttgcatagatgtacgtttcctccatt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 agctctctggatccttcttgtatccgtggatgtgttgcatagatgtacgttttctccatt 440

                                                                       
Query: 241 ccaatgtttgtcttctttcattacatctgctccccaatgaagtttatttcaaataaattc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaatgtttgtcttctttcattacatctgctccccaatgaagtttatttcaaataaattc 500

                                                                       
Query: 301 ttagaagtacagaatcccaagcagtgtagtctgtgttctgatctctggcgctatttatat 360
           ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ttagaagtacaaaatcccaaacagtgtagtctgtgttctgatctctgacgctatttatat 560

                                                                       
Query: 361 acacagcactggtccattaaaaataattatattctctttgttataatgtatcttgttagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 561 acacagcactggtccattaaaaataattatattctctttgttataatgtatcttgttagg 620

                                                                       
Query: 421 ttgctattcttgactctctaagaagtcttattttgttgaagctatgcggttactttatat 480
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 ttgctattcttgactctctaagaagtcttattttgttgaagatatgcggttactttatat 680

                                                                       
Query: 481 ggcaagagtgttttaagcctctctgtattctcacccttcccagaagagcccttaagatgt 540
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggcgagagtgttttaagcctctctgtattctcacccttcccagaagagcccttaagatgt 740

                                                                       
Query: 541 gattgttatgtaaattgactcttgcttagaatgtgcactggataaaggcacagactcttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 741 gattgttatgtaaattgactcttgcttagaatgtgcactggataaaggcacagacccttc 800

                                                         
Query: 601 cttactacagtggcacagagagatgctaaacatggtgacagaaaat 646
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttactacagtggcacagagagatgctaaacatggtgacagaaaat 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)