Query= MSMg01no452_e06.b1 MSMg01no452_e06.b1 CHROMAT_FILE:
MSMg01no452_e06.b1 PHD_FILE: MSMg01no452_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:46 2005
(621 letters)
>mm_chr12_74270528_74271548
Length = 1021
Score = 1025 bits (530), Expect = 0.0
Identities = 587/618 (94%), Gaps = 22/618 (3%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtacaccaggctggcttcaaactcacagagatccacttgcctctactt 63
||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 204 ggaattcactctgcagaccaggctggcttcaaactcacagagatccacctgcctctactt 263
Query: 64 cccgggtctgagattaaagatgtgcactgccactagctggcagacctaatatttttaagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cccgggtctgagattaaagatgtgcactgccactagctggcagacctaatatttttaagg 323
Query: 124 tcatattgtcatgaaaaaaatgaaagtcctttttaaaattgaacttcagttttcttcaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcatattgtcatgaaaaaaatgaaagtcctttttaaaattgaacttcagttttcttcaat 383
Query: 184 taatggctctataataaatagtatagtttacagtgatatgtcttacttaaattcatttcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatggctctataataaatagtatagtttacagtgatatgtcttacttaaattcatttcc 443
Query: 244 aaatccctgaagtatgttattaaatctttttacttaggtcttttaagaattgtgcatgtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaatccctgaagtatgttattaaatctttttacttaggtcttttaagaattgtgcatgtg 503
Query: 304 ccgggcagtggtggcgcacgcctttaatcccagcacttgggaggcagaggcaggcggatt 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 504 ccgggcagtggtggcgcacgcctttaatcccagcacttgggaggcagaggcaggtggatt 563
Query: 364 tctgagttcaaggccagcctggtctacagagtgagttccagaacagccagggctacacag 423
||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||
Sbjct: 564 tctgagttcaaggccagcctgatggacagagtgagttccaggacagccagggctacacag 623
Query: 424 agaaaccctgtctcgaaaaaccaaaacaaaaaaccaaaacaaaacaaaaaacagagagag 483
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 624 agaaaccctgtctcgaaaaaccaaaacaaaaaac--------------aaacagagagag 669
Query: 484 agagggagagagagagagggagagagagagagagagagagatatttgtgcatgtgatacc 543
|||| |||||||||||| ||||||||||||| |||||| ||||||||||||||||
Sbjct: 670 agag--agagagagagag----agagagagagagatagagat--ttgtgcatgtgatacc 721
Query: 544 attctctcctgattctacagtttctctgtaatcataagaattttaagaatagtgtttttg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 attctctcctgattctacagtttctctgtaatcataagaattttaagaatagtgtttttg 781
Query: 604 ggttgcatgcataactca 621
||||||||||||||||||
Sbjct: 782 ggttgcatgcataactca 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_e06.g1 MSMg01no452_e06.g1 CHROMAT_FILE:
MSMg01no452_e06.g1 PHD_FILE: MSMg01no452_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:47 2005
(585 letters)
>mm_chr12_74447576_74448560
Length = 985
Score = 1069 bits (553), Expect = 0.0
Identities = 577/585 (98%)
Strand = Plus / Minus
Query: 1 cttcagtgcatggcatctggaagctcacgggctaaggaaaaggggttaagttagaggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 cttcagtgcatggcatctggaagctcacgggctaaggaaaaggggttaagttagaggcac 726
Query: 61 cctgacagctttacctgataccatggcaaatccctgtctaaaaaacacttcatctgtatg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cctgacagctttacctgatagcatggcaaatccctgtctaaaaaacacttcatctgtatg 666
Query: 121 gatagtggctaaacacatgacaggggcttgggtaagccatggtttactaaagttcacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gatagtggctaaacacatgacaggggcttgggtaagccatggtttactaaagttcacttt 606
Query: 181 aattagaacccaaaacaaaggaacacggcctgggttttatgtttatcaaaggcagccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aattagaacccaaaacaaaggaacacggcctgggttttatgtttatcaaaggcagccaag 546
Query: 241 tgttgaaggctttggagatttgtagatatggaaaagaaaggaagagaatcgaggcttcag 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 545 tgttgaaggctttggagatttgtagatatggagaagaaaggaagagaatcgaggcttcag 486
Query: 301 ctccactctaacctgaaggtggcggcctcattagtcaatctaaacaggctcatctgagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctccactctaacctgaaggtggcggcctcattagtcaatctaaacaggctcatctgagtt 426
Query: 361 atgaggacggaagcaatcttagcaagacactcgtctcttgcttagctgtcagctcattgg 420
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 425 atgaggacggaagcaatcttagcaagacactcgactctcgcttagctgtcagctcattgg 366
Query: 421 ctgagtcccttttctgtctctgttgcaccttaagcggtccttgtcaggttatctagagtt 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 365 ctgagtcccttttctgtctctgttgcaccttaggcggtccttgtcaggttatctagagtt 306
Query: 481 cggaagcacccaggatctcatgggattcacatgactatttttaatcatcctgggtattag 540
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cggaagcacccagtctctcatgggattcacatgactatttttaatcatcctgggtattag 246
Query: 541 tgggaactggagacttcttccaggttgctctattgtcctacaagg 585
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgggaattggagacttcttccaggttgctctattgtcctacaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
