CCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTGATCTTTCCAAGACTTTTATGTTGGCTTTCTATTATTTATGTTG
TTATTGAAGATCAGTCTTAGTCCTTGGTGATCTGATAGGATGCATCGGAC
AATTTCAATATTTTTGTATCTGTTGAGGCCTGTTTTGTGACCAGTTATAT
GGTCAATTTTGGAGAAGGTACCATGAGGTGCTGAGAAGAAGGTATATCCT
TTTGTTTTAGGATAAAATGTTCTGTAGATATCTGTTAAGTCCATTTGTTT
CATCACTTCTGGTAGTTTCACTGTGTCCCTGTTTAGTTTCTGTTTCCATG
ATCTGTCCATTGGTGAAAGTGGTCTGTTGAAGTCTCCCACTATTATTGTG
TAGGGTGCAATGTGTGCTTTGAGCTTTATTAAAATTTCTTTAATGAATGT
GGCTGTCCTTGCATTTGGAGCATAGATATTCAGAATTGAGAGTTCCTCTT
GGGAGATTTTACCTTTGATGAGTATGAAGTGCCCCTCCTTGTCTTTTTTT
GATTACTTTGGGTTGGAAGTCAATTTCGTTAGATATTAGAATGGCTACTC
CAGCTTGTTTCTTCACACCATTTGCTTGGAATGTTGTTTTCCAGCCTTTC
ACTCTGAGGTAGTGTCTGTCTTTTTCCCTGAGATGAGTTTCCTGTAAGCA
GCAAAATGTTGGGTCTTGTTTGTGTAGCCAGTTTGTTAGTCTATATCTTT
TTTTTGAGGAGTTGAGTCCATTGATATTCAGAGA

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATTTGATGAACAAATGAACCTGGAACT
ATCTCGGGATGAAGTTTGCTGTTCTGTACCGAGAAGGAGAAAGAGGAGAT
ATAAAACCAGAGAGTTTCTTTTCAAGTGTACTTTAGTATATCAGCACACC
TGTACTCAAAAATACATATTAAATAATTAATATACTTTGGGTATTTTCTA
AAAATTTTAAAAAATCTGGTGAGATAATTTGAAGAAATATGCACTTGCTA
AAATTCATGCTTGTGTAGTAAGGGAAGAGGAGAAGTAGGCTTTATTTGAC
CTTTCATCCCCTGCACACCCTCAATTTACAAAGCTCTATTTACTTCAAAG
AGGCCAGGAGGAGAATGCAAAACAGCCTATTATGTTTGTGATCCTGGGAT
TGTTTTGCTGCTGGTATCCATGGGCTTTTTTCAAAGCTTATCTTTTCTAT
CCTTTTTTAATTTGCACACTTGGAAGCAGAGCAGAGTGCTTTTTCATTTT
CATATTTTTTGAGTTTCTTGAAACTATCAGTTACAACATGGACTGTATAA
TAAACACCCGCCCCACACCTTGTCTTTACATGCTAATATAAGATGCTGGA
TGTGTCAACTCTCTACAGCATTTAATGCACCTATTGTGCCACTTACACCT
GAAGTGACATCAAATGATCCTCTGAAAAATGAGATTATGATTCTCAGGGA
AAAACAAAAAGGGAAATGGGAGGGGAAATCCATTCTATATACAATCTN

Query= MSMg01no453_b22.g1 MSMg01no453_b22.g1 CHROMAT_FILE:
MSMg01no453_b22.g1 PHD_FILE: MSMg01no453_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:53 2005
         (607 letters)



>mm_chr12_39539091_39540097
          Length = 1007

 Score = 1143 bits (591), Expect = 0.0
 Identities = 603/607 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttgatgaacaaatgaacctggaactatctcgggatgaagtttgctgttctgtaccgag 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 atttgatgaacaaatgaacctggaactatctcgagatgaagtttgctgttctgtaccgag 260

                                                                       
Query: 61  aaggagaaagaggagatataaaaccagagagtttcttttcaagtgtactttagtatatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 aaggagaaagaggagatataaaaccagagagtttcttttcaagtgtactttagcatatca 320

                                                                       
Query: 121 gcacacctgtactcaaaaatacatattaaataattaatatactttgggtattttctaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcacacctgtactcaaaaatacatattaaataattaatatactttgggtattttctaaaa 380

                                                                       
Query: 181 attttaaaaaatctggtgagataatttgaagaaatatgcacttgctaaaattcatgcttg 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttttaaaaatctggtgagataatttgaagaaatatgcacttgctaaaattcatgcttg 440

                                                                       
Query: 241 tgtagtaagggaagaggagaagtaggctttatttgacctttcatcccctgcacaccctca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtagtaagggaagaggagaagtaggctttatttgacctttcatcccctgcacaccctca 500

                                                                       
Query: 301 atttacaaagctctatttacttcaaagaggccaggaggagaatgcaaaacagcctattat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttacaaagctctatttacttcaaagaggccaggaggagaatgcaaaacagcctattat 560

                                                                       
Query: 361 gtttgtgatcctgggattgttttgctgctggtatccatgggcttttttcaaagcttatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtttgtgatcctgggattgttttgctgctggtatccatgggcttttttcaaagcttatct 620

                                                                       
Query: 421 tttctatccttttttaatttgcacacttggaagcagagcagagtgctttttcattttcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttctatccttttttaatttgcacacttggaagcagagcagagtgctttttcattttcat 680

                                                                       
Query: 481 attttttgagtttcttgaaactatcagttacaacatggactgtataataaacacccgccc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attttttgagtttcttgaaactatcagttacaacatggactgtataataaacacccgccc 740

                                                                       
Query: 541 cacaccttgtctttacatgctaatataagatgctggatgtgtcaactctctacagcattt 600
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cacaccttgtctttacgtgctaatataagatgctggatgtgtcaactctctacagcattt 800

                  
Query: 601 aatgcac 607
           |||||||
Sbjct: 801 aatgcac 807


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)