Query= MSMg01no453_o05.b1 MSMg01no453_o05.b1 CHROMAT_FILE:
MSMg01no453_o05.b1 PHD_FILE: MSMg01no453_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:54 2005
(274 letters)
>mm_chr12_41023735_41024408
Length = 674
Score = 514 bits (266), Expect = e-150
Identities = 272/274 (99%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 1 aaacaaacaaacaaacatgcaaatgttctagaatgtctgtttgcacaggctctgttccat 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaacaaacaaacaaacatgcaaaagttctagaatgtctgtttgcacaggctctgttccat 261
Query: 61 atcattctgccagtgtgaagttctgtttggcaccctgtgaaatgttcatctggccaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atcattctgccagtgtgaagttctgtttggcaccctgtgaaatgttcatctggccaataa 201
Query: 121 ccaaatagcaaaagaacaatcctttaaaagaaaatgttagacacctcacaatgaactgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ccaaatagcaaaagaacaatcctttaaaagaaaatgttagacacctcacaatgaactgat 141
Query: 181 ttcaaagcacatcacatagctacaaccaccacagccattgcagtgctggcacccatggaa 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 140 ttcaaagcacatcacatagctacaaccaccacagcca-tgcagtgctggcacccatggaa 82
Query: 241 cagaacagagagccagaaataacagctcacagcc 274
||||||||||||||||||||||||||||||||||
Sbjct: 81 cagaacagagagccagaaataacagctcacagcc 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no453_o05.g1 MSMg01no453_o05.g1 CHROMAT_FILE:
MSMg01no453_o05.g1 PHD_FILE: MSMg01no453_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:54 2005
(438 letters)
>mm_chr12_40857361_40858198
Length = 838
Score = 826 bits (427), Expect = 0.0
Identities = 436/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 acatgtctgccttcagaatccagataccaaaaacctccggtgccaaaaaggccctcatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acatgtctgccttcagaatccagataccaaaaacctccggtgccaaaaaggccctcatgt 259
Query: 61 tgttttccttaaa-tttttttctacattgatttatttagtttaggaaaggcatgttcatg 119
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 260 tgttttccttaaattttttttctacattgatttacttagtttaggaaaggcatgttcatg 319
Query: 120 ccatagcacatgtgtgaagatcagaaaacaacattcaggggtttcttctctccttctaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccatagcacatgtgtgaagatcagaaaacaacattcaggggtttcttctctccttctaaa 379
Query: 180 acctaaggatagaacttgggtagtaagagtcagccctggcagaaagctcctttaaacatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acctaaggatagaacttgggtagtaagagtcagccctggcagaaagctcctttaaacatt 439
Query: 240 aagccatcttgttggcccagtgatcagttccttggtattggcactagccttttgtaaaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagccatcttgttggcccagtgatcagttccttggtattggcactagccttttgtaaaat 499
Query: 300 atgagagctttatattgtatattatatattatatgttataatctaatcctgtagtgtccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgagagctttatattgtatattatatattatatgttataatctaatcctgtagtgtccc 559
Query: 360 agtgccctgtgtaaggccacacagacacaagttatgacataaatggtgttttttttaatg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 560 agtgccctgtgtaaggccacacagacacaagttatgacataaatggtgtttttttaaatg 619
Query: 420 gactgatctaaagctgtcg 438
|||||||||||||||||||
Sbjct: 620 gactgatctaaagctgtcg 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
