Query= MSMg01no454_p15.b1 MSMg01no454_p15.b1 CHROMAT_FILE:
MSMg01no454_p15.b1 PHD_FILE: MSMg01no454_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:21 2005
(515 letters)
>mm_chr12_98550827_98551741
Length = 915
Score = 729 bits (377), Expect = 0.0
Identities = 500/592 (84%), Gaps = 81/592 (13%)
Strand = Plus / Plus
Query: 5 gaattcttctgttatacgtgtgttttgttattttttacaagtgtggttctagcaaaagaa 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gaattcttctgttaaaagtgtgttttgttattttttacaagtgtggttctagcaaaagaa 183
Query: 65 aaaaaatgtattccttttcttaggggagctgtttgaggcagtgtgggtggctgtaacaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aaaaaatgtattccttttcttaggggagctgtttgaggcagtgtgggtggctgtaacaga 243
Query: 125 atgccattctttctctctctccctcgccctccctccccctccctctctccctc--tccct 182
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 244 atgccattctttctctctctccctcgccctccctccccctccccctctccctctgtccct 303
Query: 183 ctc--------------------------------------------tccctctccctct 198
||| |||||||| ||||
Sbjct: 304 ctctctctctctctctctctctctctctctctctctctctctctctgtccctctctctct 363
Query: 199 ctccct-----------------------ctctccctc--tccctctcc----------c 223
|||||| ||||||||| ||||||||| |
Sbjct: 364 ctccctcccttgccctccctcccctccccctctccctctgtccctctccctctctctctc 423
Query: 224 tctctctctctctccctctcactctctctttctctctccacacttaccttttgttttctt 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tctctctctctctccctctcactctctctttctctctccacacttaccttttgttttctt 483
Query: 284 acagttctagagacttanaaaactaggaccaagacaccggtttgttacccgctaagcaca 343
|||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 484 acagttctagaggcttagaaaactaggaccaagacaccagtttgttacctgctaagcaca 543
Query: 344 ttcttcctcatttcttgtcttcttgtgtcttattttgatctacaggaatatccttccctg 403
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 544 ttcttcctcatttcttgtcttcttgtgccttcttttgatctacaggaatatccttccctg 603
Query: 404 gtctttctcacagaggcgttcaaatcatcctcaagatcagatcaccttccaaggtctcac 463
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gtctttctcacaaaggcgttcaaatcatcctcaagatcagatcaccttccaaggtctcac 663
Query: 464 tgccaacaccatcaccacagaccatgagcttcaccatccacattttgatgga 515
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tgccaacaccatcaccacagaccatgagcttcaccatccacattttgatgga 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_p15.g1 MSMg01no454_p15.g1 CHROMAT_FILE:
MSMg01no454_p15.g1 PHD_FILE: MSMg01no454_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:21 2005
(458 letters)
>mm_chr12_98559721_98560582
Length = 862
Score = 781 bits (404), Expect = 0.0
Identities = 446/462 (96%), Gaps = 4/462 (0%)
Strand = Plus / Minus
Query: 1 aaacctggtattccagaaaaagagccagtgctcttaatgctgggccatctttaatagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aaacctggtattccagaaaaagagccagtgctcttaatgctgggccatctttaatagcat 411
Query: 61 ctgcagattaatagatactattaatagtatctacagattaatcgagaaccttaaattaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctgcagattaatagatactattaatagtatctacagattaatcgagaaccttaaattaag 351
Query: 121 tttatgcgagatagctgtttatgtggttaca----gagaactgtgcgtgatctataactg 176
|||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 350 tttatgggagatagctgtttatatggttacagagtgagaactgtgcgtgatctataactg 291
Query: 177 tacttttagaggctatctaaacttaatcctgatattctctttgaagtcaaactggactgg 236
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 290 tacttttagaggctatctaaacttgatcctgatattctctttgaagtcaaactggactgg 231
Query: 237 ccttgaattatggttttcttcatccctaggtggtgaccctggaagtataacttagtcttc 296
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 230 ccttgaattatggttttcttcatccctagctggtgactctggaagtataacttagtcttc 171
Query: 297 taaaccgaaccttcctcagctaccattgtaactggatagagtttaggtatatcctcatgt 356
|||||| ||||||||||||||| |||||| ||||||||||||||||||| |||||||||
Sbjct: 170 taaacccaaccttcctcagctaacattgttactggatagagtttaggtagctcctcatgt 111
Query: 357 cttcacgttttgaaacttgtctctcattatgagataataagggctagaaatttaattcta 416
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 cttcccgttttgaaacttgtctctcattatgagataataagggctagaaatttaattcta 51
Query: 417 ttgtcccaattagatataggtcattttgcagctaatctggat 458
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 50 ttgtcccaattagatataggtcatttggcagctaatctggat 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 862
Length adjustment: 10
Effective length of query: 448
Effective length of database: 852
Effective search space: 381696
Effective search space used: 381696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
