Query= MSMg01no456_i07.b1 MSMg01no456_i07.b1 CHROMAT_FILE:
MSMg01no456_i07.b1 PHD_FILE: MSMg01no456_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:22 2005
(448 letters)
>mm_chr12_32169944_32170791
Length = 848
Score = 845 bits (437), Expect = 0.0
Identities = 443/445 (99%)
Strand = Plus / Plus
Query: 4 tttttttttttcatgatactgatttttttggtccaaaatacaggctaagtggtttcttac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tttttttttttcatgatactgatttttttggtccaaaatacaggctaagtggtttcttac 263
Query: 64 cacacttaaccccaggaaatctcaatataagagcttctcataaatagttaaaaagctctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacacttaaccccaggaaatctcaatataagagcttctcataaatagttaaaaagctctt 323
Query: 124 acatgaatctggctattttctaactacatgaaacaaaggggttatttggattttaacagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acatgaatctggctattttctaactacatgaaacaaaggggttatttggattttaacagt 383
Query: 184 aatatttaatagctcctaaacaggggcatgaaaaagaatcaagtttgcaccagtccaagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatatttaatagctcctaaacaggggcatgaaaaagaatcaagtttgcaccagtccaagt 443
Query: 244 acctacagtaatgatagaaacactcaccacatgtcacactatttcacgtccatgcttcta 303
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acctacagtaatgacagaaacactcaccacatgtcacactatttcacgtccatgcttcta 503
Query: 304 ataacaagaatttctcactagaaatagtgcatgagcaaaccagattctcaaaatgctaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ataacaagaatttctcactagaaatagtgcatgagcaaaccagattctcaaaatgctaca 563
Query: 364 tgtgaaaataaaattatttgctcaagaaaaaactgcattagttatttctggccagccaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtgaaaataaaattatttgctcaagaaaaaactgcattagttatttctggccagccaag 623
Query: 424 gatgaatggccatgcacattatttc 448
|||||||||||||| ||||||||||
Sbjct: 624 gatgaatggccatgtacattatttc 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_i07.g1 MSMg01no456_i07.g1 CHROMAT_FILE:
MSMg01no456_i07.g1 PHD_FILE: MSMg01no456_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:22 2005
(440 letters)
>mm_chr12_32342949_32343788
Length = 840
Score = 787 bits (407), Expect = 0.0
Identities = 436/455 (95%), Gaps = 15/455 (3%)
Strand = Plus / Minus
Query: 1 agttttgcatgaagctagatgcctgaggcattaagtatacaaagatgagaaacaagccca 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 486 agttttgcatgaagctagatgcctgaggcattaagtatacagagatgagaaacaagccca 427
Query: 61 tgcctccaagagtctgacaactgcacaaagggtcagcactcaattaacaaactaccaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgcctccaagagtctgacaactgcacaaagggtcagcactcaattaacaaactaccaacc 367
Query: 121 ataaggagcaacacaatcagaaaaaagactcaagaacaggaagaaatttacattgtttaa 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ataagaagcaacacaatcagaaaaaagactcaagaacaggaagaaatttacattgtttaa 307
Query: 181 tgttttcatagaatatgtactacttgttcatatgttgttcaccaacacagaaattccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgttttcatagaatatgtactacttgttcatatgttgttcaccaacacagaaattccagt 247
Query: 241 gcatggttattatatagttccataattcagaagagaaggatgaatttgtcttagtttgct 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gcatggttaaaatatagttccataattcagaagagaaggatgaatttgtcttagtttgct 187
Query: 301 tttctgttgtgatt---------------aaaaaaaaaaaaacagtgatctttgtagaag 345
|||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 186 tttctgttgtgatttaaaaaaaaaaaaaaaaaaaaaaaaaaacagtgatctttgtagaag 127
Query: 346 aaaacgcttattttagcctacaggttacagtctatctatcattaggaaagcaaaggtacc 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aaaacgcttattttagcctacaggttacagtctatctatcattaggaaagcaaaggtacc 67
Query: 406 atgagagctaaagttatggtttaaattttaattag 440
|||||||||||||||||||||||||||||||||||
Sbjct: 66 atgagagctaaagttatggtttaaattttaattag 32
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
