ATCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCTTTCTTACAACATTGTGTTGTATGTAGGTCGAAACATTATTTG
CAAGAAAAACTATGCTAGATAAAATAAAGACTAAAATGGGTAGAGTCTCC
ATTAAGCTGAACCTATATTGGGCAAACCAGACTATTAGATAGCTGAAGAC
TCACAGAGAGATCAGCTCTTATGCATCTAATTGAGAAGGAGACTTCACCT
TTTTTTGTAATAAGAGATGTGCAGACAGTTTTCACTCCAAGGATTAGCAC
AATTTCTTTTTTTTTTTTAGATTTATTTATTATTATATGTAAGTACACTG
TAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTTGTTACGGATG
GTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACCCTGGACCTTCGGAA
GAGCAGTCGGGTGCTCTTACCCACTGAGTCATCTCACCAGCCCAGGACAA
TTTCTTTTTGTCTCTGGTGCTGCCTGTTTCCCCCCGTGGCTGGCTTTCCG
TCCCTTTTTCCCCCACGGGGTGGTTTTGGGTTATGAAAAATATCGCTGTC
TTCCCCTTTTTCCCCCCCTTTTTCTCCCCCCCCATTTTCTTTCCCTCTTT
TCTTTTTTTATTCCTCCCTACTCCTTCCCCTCTTCATTTTCCCCTTCCTT
TTTTTTTCCTATCTTTATTTATTTTCTCTCTCACTATTAAACTCATTTTT
TTTTTCCCCCTTTTCTTCCTT

ATTTACTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATATTGGTTCCCTGA
ACTGTAGAGTGAGGGCTATTATGGTTGGAAAGGCCAAATGGAAGCCTTTA
GAGTTGCCTCTGCCAAAGAAAATAGTGAATCAAAAACAGTATCGTATTCC
TGGAGGAATTGCAGAAATTACTGCCACTATCAAGGACTTGAAAGATGCAG
GGGTGGTGGTTCCCACCACATCTCCGTTTAACTCTCCTATCTGGCCAGTG
CAGAAAACAGATGGATCATGGAGAATGACTGTTGATTACCAAAAACTAAA
TCAGGTAGTAACTCCAATTGCAGCTGCTGTACCAGATGTAGTTTTCTTAC
TTGAGCAAATTAACACATCTCCTGGCACCTGGCATGCGGCTATTGATCTG
GCAAATGCCTTCTTCTCAGTACCTGTCCCATAGGACCACCACAACCAATT
TTGCTTTCTCGTGGCTAGGCTCATCACTATTCCTCTCCAGTTTTGCTTCA
GTGAAAAACTTTTTCTCCTGCCCTGGTGTCTAATTTTTTTTATCAATCTT
TTTTGCCCCTCTTCTTTTCCCTCCCTTATATCTCCTTTTGTCCCCCACTT
CCGTTCTACCCTATGTTCCTTTTTTTTCCCTCTTTTTTCTTATCTCTTTA
CTCCTTTTGCCTCTTTTTTTTTCCCCCTATCTTTTTTCATCTTTATCTTC
TTTATTCCACCTCACTTTGTATTCCCTCCTGCCCCTTTGTCTATTAA

Query= MSMg01no456_l23.b1 MSMg01no456_l23.b1 CHROMAT_FILE:
MSMg01no456_l23.b1 PHD_FILE: MSMg01no456_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:40 2005
         (426 letters)



>mm_chr12_93196960_93197786
          Length = 827

 Score =  770 bits (398), Expect = 0.0
 Identities = 419/428 (97%), Gaps = 5/428 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccctttcttaca-acattgtgttgtatgtaggtcgaaacattatttgcaagaaa 62
           |||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctttctgatatacattgtgttgtatgtaggtcgaaacattatttgcaagaaa 263

                                                                       
Query: 63  aactatgctagataaaataaagactaaaatgggtagagtctccattaagctgaacctata 122
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aactatgcaagataaaataaagactaaaatgggtagagtctccattaagctgaacctata 323

                                                                       
Query: 123 ttgggcaaaccagactattagatagctgaagactcacagagagatcagctcttatgcatc 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgggcaaaccagactattagatagctgaagactcacagagagatcagctcttatgcatc 383

                                                                       
Query: 183 taattgagaaggagacttcacctttttttgtaataagagatgtgcagacagttttcactc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taattgagaaggagacttcacctttttttgtaataagagatgtgcagacagttttcactc 443

                                                                       
Query: 243 caaggattagcacaatttctttttttttttt----agatttatttattattatatgtaag 298
           |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||
Sbjct: 444 caaggattagcacaatttcttttttttttttttaaagatttatttattattatatgtaag 503

                                                                       
Query: 299 tacactgtagctgtcttcagacacaccagaagagggagtcagatcttgttacggatggtt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tacactgtagctgtcttcagacacaccagaagagggagtcagatcttgttacggatggtt 563

                                                                       
Query: 359 gtgagccaccatgtggttgctgggatttgaaccctggaccttcggaagagcagtcgggtg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 564 gtgagccaccatgtggttgctgggatttgaaccctggaccttcggaagagcagtcggttg 623

                   
Query: 419 ctcttacc 426
           ||||||||
Sbjct: 624 ctcttacc 631


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 827
Length adjustment: 9
Effective length of query: 417
Effective length of database: 818
Effective search space:   341106
Effective search space used:   341106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)